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UnknownThe prevalence of symptomatic and asymptomatic malaria and its associated factors in Debre Elias district communities, Northwest Ethiopia.
Not available
S-EPMC9166605 | biostudies-literature
UnknownAssessment of Mycobacterium tuberculosis transmission in Oxfordshire, UK, 2007-12, with whole pathogen genome sequences: an observational study.
Not available
S-EPMC4571080 | biostudies-literature
ProteomicsRe-analysis of Hela phosphoproteome (PXD000612) with TagGraph
Thousands of protein post-translational modifications (PTMs) dynamically impact nearly all cellular functions. Although mass spectrometry is suited to PTM identification, it has historically been biased towards a few with established enrichment procedures. To measure all possible PTMs across diverse...
ORGANISM(S): Homo sapiens (Human) 
2019-03-12 | PXD008899 | Pride
Taggraph Ptm Hela Posphorylation 
TranscriptomicsPlacental infection single-cell and single-nuclei maps
This resource comprises a single-cell multi-lineage map of first trimester infected placental cells. We have included data from both uninfected cells and cells infected with three pathogens known to cause maternal and fetal disorders: Plasmodium falciparum, Listeria monocytogenes, and Toxoplasma gon...
ORGANISM(S): Homo sapiens 
2024-03-01 | E-MTAB-12795 | biostudies-arrayexpress
GenomicsIntegrative Analyses of Gene Expression and DNA Methylation Profiles in a Breast Cancer Cell Line Model of Tamoxifen-Resistance Indicate a Crucial Role of Cells with Stem-like Properties
Purpose: Development of resistance to tamoxifen is an important clinical issue in the treatment of patients with breast cancer. Tamoxifen resistance may be the result of the acquisition of epigenetic regulation such as DNA methylation within breast cancer cells resulting in changed mRNA expression o...
ORGANISM(S): Homo sapiens 
2014-02-03 | E-GEOD-40665 | biostudies-arrayexpress
TranscriptomicsExpression analysis of Desulfovibrio africanus strain Walvis Bay
Investigation of partial genome gene expression level changes in a Desulfovibrio africanus during exponential and stationary phase growth in the presence and absence of 5 ug/L Hg2+ (as HgNO3). Desulfovibrio africanus is a known mercury methylating bacteria A 3 chip study using total RNA recovered fr...
ORGANISM(S): Desulfovibrio africanus str. Walvis Bay 
2012-06-06 | E-GEOD-32580 | biostudies-arrayexpress
UnknownThe duodenal microbiome is altered in small intestinal bacterial overgrowth.
Not available
S-EPMC7347122 | biostudies-literature
TranscriptomicsHeLa cell response to overexpression of wild type and mutated forms of the P19 splice variant of c-H-ras
The c-H-ras proto-oncogene undergoes alternative splicing of the exon termed IDX giving rise to a novel protein of the Ras family, p19 (H-RasIDX). The experiment tests the effect on the transcriptome of overexpressing the wild type and W164A mutated forms of p19. Keywords: genetic modification Thre...
ORGANISM(S): Homo sapiens 
2009-12-29 | E-GEOD-12059 | biostudies-arrayexpress
ProteomicsLactonase Specificity is Key to Quorum Quenching in Pseudomonas aeruginosa
The human opportunistic pathogen Pseudomonas aeruginosa orchestrates the expression of many genes in a cell density-dependent manner by using a molecular communication system referred to as quorum sensing (QS). This bacterium uses an intricate network of regulators and QS molecules known as autoindu...
ORGANISM(S): Escherichia coli 
2020-05-27 | PXD017421 | Pride
Quorum sensing (qs) Lc-msms Virulence Ahl (n-acyl-homoserine lactone) Lactonase Quorum quenching (qq) Pseudomonas aeruginosa 
ProteomicsAbsolute protein quantification of Mycoplasma pneumoniae proteome by combining selected reaction monitoring of a reduced set of labeled peptides and label-free shotgun mass spectrometry.
We quantified the protein abundances of Mycoplasma pneumoniae (Mpn), a genome-reduced organism, by combining selected reaction monitoring of a reduced set of labeled peptides and label-free shotgun mass spectrometry. A set of 77 labeled peptides were synthesized and used as internal standard peptide...
ORGANISM(S): Mycoplasma pneumoniae (strain ATCC 29342 / M129) 
2023-08-31 | PXD035159 | Pride
Mycoplasma pneumoniae Absolute quantification Label-free Selected reaction monitoring 
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