Gao Junjie J - OmicsDI

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Proteomics (4)
Unknown (2)
Metabolomics (2)

Organisms

Homo sapiens (1)
Human CSF-associated densovirus (1)
Sus scrofa domesticus (1)
Alphavirus (1)
Betaherpesvirinae (1)
Brassica oleracea var. oleracea (1)
Cowpox virus (1)
Coxsackievirus (1)
Cytomegalovirus (1)
Dengue virus (1)
EFO:0001352 (1)
Filoviridae (1)
Hepatitis B virus (1)
Human alphaherpesvirus 1 (1)
Human betaherpesvirus 5 (1)
Human immunodeficiency virus 1 (1)
Human immunodeficiency virus 2 (1)
Influenza A virus (1)
Influenza C virus (1)
Japanese encephalitis virus (1)
Japanese encephalitis virus group (1)
Lyssavirus rabies (1)
Monkeypox virus (1)
Mus musculus (1)
Nostoc sp. PCC 7120 = FACHB-418 (1)
Oropouche virus (1)
Orthopoxvirus (1)
Orthopoxvirus vaccinia (1)
Rattus (1)
Ruditapes decussatus (1)

Repository

iProX (3)
MetaboLights (2)
pride (1)

Tissue

Cell culture (1)
HeLa cell (1)
Permanent cell line cell (1)

Disease

Cervix carcinoma (1)
Disease free (1)

Technology Type

Mass spectrometry (2)
Affinity purification coupled with mass spectrometry proteomics (1)
Mass Spectrometry (1)

Instrument Platform

Gas Chromatography MS - Positive (GC-MS (Positive)) (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2022 (2)
2020 (2)
2025 (1)
2017 (1)

CHEBI ID

CHEBI:10221 (2)
CHEBI:28903 (2)
CHEBI:168226 (1)
CHEBI:187390 (1)
CHEBI:185326 (1)
CHEBI:192966 (1)
CHEBI:192965 (1)
CHEBI:186342 (1)
CHEBI:192964 (1)
CHEBI:192963 (1)
CHEBI:183529 (1)
CHEBI:185673 (1)
CHEBI:191816 (1)
CHEBI:165484 (1)
CHEBI:138490 (1)
CHEBI:192962 (1)
CHEBI:192961 (1)
CHEBI:192960 (1)
CHEBI:187304 (1)
CHEBI:192959 (1)
CHEBI:191433 (1)
CHEBI:192958 (1)
CHEBI:192957 (1)
CHEBI:168236 (1)
CHEBI:192955 (1)
CHEBI:165327 (1)
CHEBI:192954 (1)
CHEBI:192953 (1)
CHEBI:192952 (1)
CHEBI:10357 (1)

Metabolite Name

Copaene (2)
6-{[(3,4,5-trihydroxy-6-methyloxan-2-yl)oxy]methyl}oxane-2,3,4,5-tetrol (1)
Scutellarein 6,7,4'-trimethyl ether 5-(6'''-acetylglucosyl)(1->3)-galactoside (1)
9,12,15-Eicosatriynoic acid (1)
4,4,14alpha-trimethyl-5alpha-cholest-9(11),24-dien-3beta-ol (1)
7,8-epoxy-17S-HDHA (1)
7,3',4'-Trihydroxy-5-methoxy-6-C-methylflavanone 7-O-glucoside (1)
3-Ketohexanoyl-CoA (1)
Quercetin 3-(2''-galloylgalactoside) (1)
Gibberellin A3 O-beta-D-glucoside (1)
Kenusanone D (1)
5S,6-Ep-18S-HEPE (1)
Transilitin (1)
6-{[2-({4,5-dihydroxy-6-methyl-2-[(3,4,5,6-tetrahydroxyoxan-2-yl)methoxy]oxan-3-yl}oxy)-3,5-dihydroxy-6-methyloxan-4-yl]oxy}-3,4,5-trihydroxyoxane-2-carboxylic acid (1)
9,10-dihydroxy-13-hydroperoxy-11-octadecenoic acid (1)
Quercetin 3-gentiobioside-7-glucuronide (1)
Quercetin 4'-glucuronide (1)
Maritimetin 6-(6''-acetylglucoside) (1)
8,11,14,18-Eicosatetraynoic acid (1)
3,5,7,3',4'-Pentahydroxy-6-methoxyflavan 3-O-[glucopyranosyl-(4->1)-alpha-D-xylopyranoside] (1)
4Z,8Z,11Z-Heptadecatriene (1)
Luteolin 7-(6''-malonylneohesperidoside) (1)
(22E)-(24R)-24,25-dihydroxy-22,23-didehydrovitamin D3 (1)
14-F2-dihomo-IsoP (1)
Genistein 7,4'-bis(O-glucosylapioside) (1)
Adonitoxigenin (1)
6,9,12-Eicosatriynoic acid (1)
Kaempferol 3-sophoroside-7-(2''-ferulylglucoside) (1)
3Z,6Z,9Z-Octadecatriene (1)
5,2',4',5'-Tetrahydroxy-7-methoxy-4-phenylcoumarin 5-O-glucoside (1)

Release Date

2021 (1)
2012 (1)

Lab affiliation

Experimental Radiation Oncology, The University of Texas, MD Anderson Cancer Center (1)

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Transcriptome and metabolome changes in Chinese cedar during cold acclimation reveal the roles of flavonoids in needle discoloration and cold resistance

Cryptomeria fortunei growth and development are usually affected by low temperatures. Despite the evergreen nature of this species, most needles turn yellowish-brown in cold winters. The underlying discoloration mechanisms that cause this phenomenon in response to cold acclimation remain...

2022-08-12 | MTBLS3184 | MetaboLights

AP-MS in CRISPR/Cas9 Utilizing Systems for Mapping Endogenous Protein Complexes

We combined clustered regularly interspaced short palindromic repeats/Cas9-mediated gene knockout technology with affinity purification using antibodies against endogenous proteins followed by mass spectrometry analysis, to sensitively and precisely detect protein-protein interactions in unaltered i...

ORGANISM(S): Homo sapiens (Human)

2017-03-15 | PXD005107 | Pride

Identification of MGF505-3R interacting proteins by LC-MS/MS

Co-immunoprecipitation assay was investigated and subjected to SDS-PAGE. The gels were stained by Coomassie Brilliant Blue G-250 and sent to Novogene (Beijing, China) for LC-MS/MS analysis to identified the potential interaction protein between MGF360-13L and host protein.

ORGANISM(S): Sus Scrofa Domesticus

2025-05-30 | PXD064545 |

Aberrant gut microbiota alters host metabolome and impacts renal failure in humans and rodents

OBJECTIVE: Patients with renal failure suffer from symptoms caused by uraemic toxins, possibly of gut microbial origin, as deduced from studies in animals. The aim of the study is to characterise relationships between the intestinal microbiome composition, uraemic toxins and rena...

2020-10-20 | MTBLS700 | MetaboLights

Mass spectrometry with DIA quantification of cerebrospinal fluid in 20 subarachnoid hemorrhage patients

We applied mass spectrometry with DIA quantification to identify biomarker candidates in CSF samples from a well-characterized cohort consisted of 20 SAH patients.

ORGANISM(S): Human Csf-associated Densovirus

2022-03-08 | PXD032118 |

Raw data of 218 FFPE tissue proteomes containing 144 tissue samples from seven organs of fatal VID-19 cases and 74 control specimens from 56 non-COVID-19 individuals

144 tissue samples from postmortem lung, liver, kidney, heart, spleen, testis and thyroid collected from 19 COVID-19 cases and 74 control specimens from 56 non-COVID-19 individuals were analyzed by PCT and TMT 16-plex based proteomics.

ORGANISM(S): Homo Sapiens

2020-12-11 | PXD022775 |

Using CSF biomarkers to replicate genetic associations in Alzheimer's disease.

Not available

S-EPMC3150628 | biostudies-literature

Mortality from gastrointestinal congenital anomalies at 264 hospitals in 74 low-income, middle-income, and high-income countries: a multicentre, international, prospective cohort study.