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TranscriptomicsVitamin C Stimulon in Mycobacterium tuberculosis
The emergence of drug resistance among tuberculosis (TB) patients is often associated with their non-compliance to the length of the chemotherapy, which can reach up to 2 years for the treatment of multi-drug-resistant (MDR) TB. Drugs that would kill TB faster and would not lead to the development ...
ORGANISM(S): Mycobacterium tuberculosis H37Rv 
2013-05-24 | E-GEOD-42293 | biostudies-arrayexpress
UnknownGIL, a new c-di-GMP-binding protein domain involved in regulation of cellulose synthesis in enterobacteria.
Not available
S-EPMC4116459 | biostudies-literature
Transcriptomicscdr2 siRNA knockdown during passage through mitosis: HeLa cells, Rat1 wild type and c-myc null cells
[Hela cells]: We performed cdr2 knockdown with a pool of 4 cdr2-specific siRNAs to test whether cdr2 may regulate c-myc target genes as cells passage through mitosis. [Rat1a wild type and myc null cells]: We performed cdr2 knockdown using a pool of 4 cdr2-specific siRNAs to test whether cdr2 may r...
ORGANISM(S): Rattus norvegicus 
2010-04-07 | E-GEOD-20037 | biostudies-arrayexpress
ProteomicsDifferent protein cargo of extracellular vesicles from yeast or hyphal Candida albicans cells
Extracellular vesicles (EVs) are shed from cells of almost every type of cell or organism. These nano- to micrometer scaled lipid bilayer delimited spheres shuttle a set of bioactive molecules involved in many processes including cell-cell communication, host-pathogen interactions and even the shari...
ORGANISM(S): Candida albicans (Yeast) 
2022-04-07 | PXD021488 | Pride
Hyphae Dimorphic transition C. albicans Extracelullar vesicles Yeast Proteome 
ProteomicsHuman THP1 macrophages after interacting with C. albicans, using ATP-binding protein enrichment strategy
Macrophages are involved in the primary human host response to pathogens such as Candida albicans. After pathogen recognition by specific receptors, a cascade of signaling pathways is activated, leading to the production of cytokines, chemokines and antimicrobial peptides. ATP binding proteins are c...
ORGANISM(S): Candida albicans (Yeast) 
2019-04-18 | PXD009938 | Pride
Phosphopeptides Silac Atp-binding proteins Macrophages Candida albicans 
UnknownGIL: a python package for designing custom indexing primers.
Not available
S-EPMC10246578 | biostudies-literature
TranscriptomicsTranscription profiling of mouse 3T3 cells transfected with pCMV-HA-ATCE1-C-del plasmid, driving the expression the nuclear form of ATCE1 vs. controls reveals gene upregulation by the ATCE1 transcription factor
ATCE1 is a transcription factor that belongs to the CREB3 subtype of the ATF/CREB transcription factor family. In order to get an indication of the potential promoters ATCE1 targets, a nuclear form was expressed in NIH 3T3 fibroblasts via transfection and upregulated genes were sought after. Experi...
ORGANISM(S): Mus musculus 
2008-06-12 | E-GEOD-2747 | biostudies-arrayexpress
UnknownChromosome-encoded narrow-spectrum Ambler class A beta-lactamase GIL-1 from Citrobacter gillenii.
Not available
S-EPMC1855525 | biostudies-literature
TranscriptomicsSpecies- and condition-specific adaptation of the transcriptional landscapes in Candida albicans and Candida dubliniensis
Although Candida albicans and Candida dubliniensis are most closely related, both species significantly behave differently with respect to morphogenesis and virulence. In order to gain further insight into the divergent routes for morphogenetic adaptation in both species, we investigated qualitative...
ORGANISM(S): Candida albicans 
2013-04-17 | E-GEOD-41749 | biostudies-arrayexpress
ProteomicsLabel free comparison of the protein cargo of extracellular vesicles (EVs) isolated from SC5314 and ecm33∆ mutant cells of Candida albicans after 16 hours of growth in YPD medium
Given the tendency to substitute cellular vaccines with acellular ones, and the complete lack of virulence shown by the C. albicans cell wall mutant ecm33∆, we performed the characterization of its EVs and test their possible use as vaccine for invasive candidiasis. Label free proteomics was carried...
ORGANISM(S): Candida albicans (Yeast) 
2025-05-07 | PXD055891 | Pride
C. albicans Ecm33 mutant Extracellular vesicles 
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