Ip April A - OmicsDI

Show results for

Unknown (127)
Proteomics (47)
Transcriptomics (44)
Genomics (6)
Clinical (1)

Organisms

Homo sapiens (39)
Mus musculus (22)
Caenorhabditis elegans (14)
Drosophila melanogaster (4)
Plasmodium berghei (2)
Saccharomyces cerevisiae (2)
Rattus norvegicus (2)
activated sludge metagenome (1)
uncultured prokaryote (1)
Solanum phureja (1)
Populus x canadensis (1)
Schizosaccharomyces pombe (1)
Staphylococcus aureus (1)
Arabidopsis thaliana (1)
Coxiella burnetii cb109 (1)
Leishmania infantum JPCM5 (1)
Leishmania mexicana MHOM/GT/2001/U1103 (1)
Sus scrofa domesticus (1)
Trypanosoma brucei (1)

Organisms

Mus (1)

Repository

biostudies-arrayexpress (49)
pride (47)
ENA (1)

Tissue

Cell culture (16)
Epithelial cell (7)
Fibroblast (4)
Kidney (4)
HEK-293 cell (3)
Permanent cell line cell (3)
Brain (2)
Cell suspension culture (2)
Nerve cord (2)
Breast (1)
Dendritic cell (1)
Early embryonic cell (1)
Embryonic kidney cell line (1)
Embryonic stem cell (1)
HEK-293T cell (1)
Kidney epithelial cell (1)
Lung (1)
Malignant cell (1)
Melanocyte (1)
Plasma cell (1)
Primary cell (1)
Retinal pigment epithelial cell (1)
Stem cell (1)

Disease

Breast cancer (2)
Neoplasms (1)
Alzheimer's disease (1)
Attention deficit hyperactivity disorder (1)
Autism spectrum disorder (1)
Cervix carcinoma (1)
Fanconi anemia (1)
Head and neck squamous cell carcinoma (1)
Malignant neoplasm of ovary (1)
Melanoma (1)
Multiple myeloma (1)
Tularemia (1)

Technology Type

Mass Spectrometry (47)
Affinity purification coupled with mass spectrometry proteomics (21)
Shotgun proteomics (14)
Data-dependent acquisition (11)
Bottom-up proteomics (10)
Data-independent acquisition (6)
Gel-based experiment (3)
DiaPASEF (1)
SWATH MS (1)

Instrument Platform

NextSeq 500 (2)

Publication Date

2010 (24)
2026 (10)
2024 (9)
2025 (6)
2021 (5)
2013 (5)
2023 (5)
2020 (5)
2014 (4)
2009 (4)
2022 (4)
2012 (3)
2006 (3)
2015 (2)
2018 (2)
2016 (1)
2011 (1)
2008 (1)
2019 (1)
2017 (1)

First Public Date

2023 (1)

Modification

2x(15)N labeled L-lysine (1)

Study status

Recruiting (1)

Study type

Transcription profiling by array (19)
Transcription profiling by tiling array (14)
ChIP-seq (5)
Unknown experiment type (2)
ChIP-chip by tiling array (2)
RNA-seq of coding RNA (2)
Transcription profiling by SAGE (1)
High-throughput sequencing (1)
RNAi profiling by array (1)
Comparative genomic hybridization by array (1)
Methylation profiling by array (1)
Interventional (1)

Release Date

2021 (30)
2010 (24)
2024 (18)
2022 (18)
2023 (16)
2025 (14)
2020 (9)
2013 (7)
2015 (6)
2014 (6)
2012 (4)
2009 (4)
2019 (4)
2018 (4)
2006 (3)
2017 (3)
2016 (2)
2026 (2)
2011 (1)
2008 (1)

Lab affiliation

Department of Molecular Biology, Faculty of Science, Radboud Institute for Molecular Life Sciences (RIMLS), Radboud University Nijmegen, 6525 GA Nijmegen, The Netherlands (2)
UMR 7367 CNRS-UL IMoPA Biopôle de l'Université de Lorraine Campus Brabois-Santé 9 avenue de la forêt de Haye 54505 Vandoeuvre-les-Nancy FRANCE (2)
1. Quantitative Biosciences Institute (QBI), University of California, San Francisco, San Francisco, CA, USA. 2. Department of Bioengineering and Therapeutic Sciences, University of California San Francisco, San Francisco, CA, USA. (1)
Amsterdam UMC, Vrije Universiteit Amsterdam, Medical Oncology, Cancer Center Amsterdam, OncoProteomics Laboratory, Amsterdam, Netherlands (1)
Biomedical Research Center, University Hospital Hradec Kralove, Sokolska 581, 500 05 Hradec Kralove, Czechia (1)
Brigham Young University (1)
CHU de Quebec Research Center-Laval University 2705 Laurier Blvd., Quebec (QC), Canada G1V 4G2 Phone: (418) 525-4444, ext. 47608; Fax: (418) 654-2715 (1)
Center for Integrative Genomics, University of Lausanne, Switzerland (1)
Center for Neuroscience and Cell Biology of theUniversity of Coimbra (1)
Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Dr Aiguader 88, 08003 Barcelona, Spain; Universitat Pompeu Fabra (UPF), 08003 Barcelona, Spain. (1)
College of Veterinary Medicine, Northwest A&F University, Yangling, Shaaxi 712100, P. R. (1)
Complex Carbohydrate Research Center, Department of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia, USA. (1)
Department of Biochemistry and Signal Transduction, University Medical Center Hamburg-Eppendorf, Hamburg, Germany (1)
Department of Biochemistry, Purdue University, West Lafayette, IN USA (1)
Department of Biology, University of Fribourg Chemin du Musée 10, 1700 Fribourg, Switzerland T +41 26 300 8631 (1)
Department of Chemistry, Biochemistry and Pharmaceutical Sciences, University of Bern, Bern, Switzerland (1)
Department of Immunotechnology, Lund University, Medicon Village, Lund, Sweden (1)
Department of Molecular Biology, Massachusetts General Hospital, Boston, MA, USA; Department of Genetics, The Blavatnik Institute, Harvard Medical School, Boston, MA, USA. (1)
Dr. Jörn Dengjel Department of Biology, University of Fribourg Chemin du Musée 10, 1700 Fribourg, Switzerland T +41 26 300 8631 (1)
EDyP (1)
Emory University School of Medicine Departments of Biochemistry and Neurology (1)
Emory University School of Medicine Departments of Biochemistry, Neurology (1)
Head of Proteomics at Glasgow Polyomics, College of Medical Veterinary and Life Sciences, University of Glasgow, UK (1)
Hematology, Department of Translational and Precision Medicine, Sapienza University, Rome, Italy. (1)
Institute of Biochemistry II University Hospital Building 75 Theodor-Stern-Kai 7 60590 Frankfurt (Main) (1)
Institute of Biochemistry II, Faculty of Medicine, Goethe University, Theodor-Stern-Kai 7, 60590 Frankfurt am Main, Germany (1)
Institute of Biochemistry and Signal Transduction, University Medical Center Hamburg-Eppendorf (UKE), Martinistraße 52, 20246 Hamburg, Germany (1)
Ludwig-Maximilians-University Munich (LMU), Department Biology I, Großhaderner Str. 2, D-82152 Planegg-Martinsried, Germany (1)
Model Animal Research Center of Medical School, Nanjing University, Nanjing, China (1)
Model Animal Research Center, Medical School, Nanjing University (1)

Location

France (1)

Keyword

Malignant colon tumor (1)
Malignant rectum tumor (1)
Virtual reality (1)
Virtual reality immersion (1)

Previous page
1 / 23
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 23
Next page

Sort by:

Relevance

Page size

Development of gene expression signatures for latent and clinical tuberculosis (TB)

For further identify the differentiation between latent and clinical tuberculosis (TB), we employed whole genome microarray expression profiling to study genes with significant expression change in peripheral CD4+T cells between healthy control, latent tuberculosis (LTB) and clinical tuberculosis (T...

ORGANISM(S): Homo sapiens

2012-08-06 | E-GEOD-27882 | biostudies-arrayexpress

Identification of DDR1-interacting proteins by IP-MS screening

To investigate and identify the potential DUBs that stabilize and interact with DDR1, we performed immunoprecipitation of endogenous DDR1 with anti-DDR1 antibody (specific IP) or anti-IgG antibody (negative control) in A549 cells followed by mass spectrometry analysis.

ORGANISM(S): Homo sapiens (Human)

2025-09-08 | PXD065332 | Pride

APRIL/BLyS Blockade Reduces Donor-specific Antibodies in Allosensitized Mice.

Not available

S-EPMC6594891 | biostudies-literature

Observational cohort study of IP-10's potential as a biomarker to aid in inflammation regulation within a clinical decision support protocol for patients with severe COVID-19.

Not available

S-EPMC7802954 | biostudies-literature

MCF7 treated with abemaciclib nuclear Rb IP LC-MSMS

The retinoblastoma protein (Rb) is a tumour suppressor best known for repressing E2F transcription factors and halting cell cycle progression1. In hormone receptor-positive (HR+) breast cancer, CDK4/6 inhibitors activate Rb by preventing its phosphorylation, forming a key component of current endocr...

ORGANISM(S): Homo sapiens (Human)

2026-06-23 | PXD066496 | Pride

Rb Lc-msms Cdk4/6i Ip Breast cancer

High APRIL Levels Are Associated With Slow Disease Progression and Low Immune Activation in Chronic HIV-1-Infected Patients.

Not available

S-EPMC7396611 | biostudies-literature

Skin layer-specific transcriptional profiles in normal and recessive yellow (Mc1r/Mc1r) mice

Total RNA was extracted from three partially overlapping dorsal skin layers derived from P2.5 normal (E+/E+) and recessive yellow (e/e) mice, as well as from an immortalized mouse melanocyte cell line (melan-a). Replicate samples (cy5) were labelled and co-hybridized with a reference RNA sample (cy3...

ORGANISM(S): Mus musculus

2006-05-24 | E-GEOD-4910 | biostudies-arrayexpress

Rapid and sustained decline in CXCL-10 (IP-10) annotates clinical outcomes following TNFα-antagonist therapy in hospitalized patients with severe and critical COVID-19 respiratory failure.

Not available

S-EPMC8376916 | biostudies-literature

Pol II chromatin immunoprecipitation in S. cerevisiae

In Saccharomyces cerevisiae short non-coding RNA (ncRNA) generated by RNA Polymerase II (Pol II) are terminated by the NRD complex consisting of Nrd1, Nab3 and Sen1. We now show that Pcf11, a component of the cleavage and polyadenylation complex (CPAC), is generally required for NRD-dependent transc...

ORGANISM(S): Saccharomyces cerevisiae

2015-04-02 | E-GEOD-67483 | biostudies-arrayexpress

APRIL: A double-blind, placebo-controlled, randomized, Phase Ib/IIa clinical study of ApTOLL for the treatment of acute ischemic stroke.

Not available

S-EPMC9999729 | biostudies-literature

Previous page
1 / 23
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 23
Next page

Sort by:

Relevance

Page size

225 Results

Show results for

Organisms

Organisms

Repository

Tissue

Disease

Technology Type

Instrument Platform

Publication Date

First Public Date

Modification

Study status

Study type

Release Date

Lab affiliation

Location

Tags

Keyword

OmicsDI is part of the ELIXIR infrastructure

Tweets