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UnknownHaploPOP: a software that improves population assignment by combining markers into haplotypes.
Not available
S-EPMC4521458 | biostudies-literature
GenomicsGenome-wide landscape of liver X receptor chromatin binding and gene regulation
Gene expression: Identification of primary target genes of liver X receptor (LXR) in an immune-related cellular model (THP-1 cells) to study, in conjunction with LXR binding data from ChIP-seq, the genome-wide mechanisms of transcriptional regulation by LXR. ChIP-Seq: We performed ChIP-seq in macro...
ORGANISM(S): Homo sapiens 
2012-02-02 | E-GEOD-28319 | biostudies-arrayexpress
ProteomicsCharacterization of HAP-1 METTL9 KO cells
LAbel free quantitation of HAP1 WT and METTL9 KO cells. METTL9 is a recently established human histidine specific methyltransferase.
ORGANISM(S): Homo sapiens (Human) 
2021-04-28 | PXD023075 | Pride
Human Cell Lc-ms/ms 
UnknownUPF1 regulates myeloid cell functions and S100A9 expression by the hnRNP E2/miRNA-328 balance.
Not available
S-EPMC5004132 | biostudies-literature
TranscriptomicsGenotyping of SNP array in individuals with San ancestry in southeastern Africa
Only a few scattered groups with oral traditions of Khoe-San hunter-gatherer ancestry remain in southeastern Africa. We investigate genomic variation of remaining individuals from two South African groups with oral histories connecting them to eastern San groups, i.e., the San from Lake Chrissie and...
ORGANISM(S): Homo sapiens 
2016-09-21 | E-MTAB-5119 | biostudies-arrayexpress
ProteomicsCharacterization of METTL9-mediated methylation of DNAJB12
The analysis is part of a study aimed at characterizing a new human histidine-specific methyltransferase denoted METTL9. The putative METTL9 substrate DNAJB12 was immunoprecipitated from HEK293 cells and its PTM status was assessed by LC-MSMS.
ORGANISM(S): Homo sapiens (Human) 
2020-11-19 | PXD020010 | Pride
Lc-msms Hek293 Methylation 
UnknownLow Abundance of Methanotrophs in Sediments of Shallow Boreal Coastal Zones With High Water Methane Concentrations.
Not available
S-EPMC7362727 | biostudies-literature
ProteomicsGlobal characterization of miR-574-5p decoy to CUGBP1 in human lung cancer using a mass spectrometry proteomics approach
We aimed to characterize decoy to the RNA-binding protein CUG-RNA binding protein 1 (CUGBP1 mechanism in A549 lung cancer cells. We identified several new canonical targets of CUGBP1 but those were not regulated by miR-574-5p via the decoy mechanism. This can be explained by the localization of CUG...
ORGANISM(S): Homo sapiens (Human) 
2020-03-02 | PXD016803 | Pride
Cugbp1 Mir-574-5p Human Lung cancer Mpges-1 
TranscriptomicsComprehensive analysis of microRNA expression in the human developing brain reveals microRNA-10 as a caudalizing factor
MicroRNAs (miRNAs) have been implicated in regulating multiple processes during brain development in various species. However, the function of miRNAs in human brain development remains largely unexplored. Here, we provide a comprehensive analysis of miRNA expression of regionalized neural progenitor...
ORGANISM(S): Homo sapiens 
2015-04-23 | E-GEOD-68189 | biostudies-arrayexpress
UnknownIncorporation of a single His residue by rational design enables thiol-ester hydrolysis by human glutathione transferase A1-1.
Not available
S-EPMC516542 | biostudies-literature
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