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UnknownEmergence of the Asian lineage of Zika virus in Angola: an outbreak investigation.
Not available
S-EPMC6892302 | biostudies-literature
TranscriptomicsThe genetics of splicing in neuroblastoma
Regulation of mRNA splicing is a critical and tightly regulated cellular function, underlying the majority of proteomic diversity in our genomes. While disruption of this process is common in disease, the basic genetic complexity of alternative splicing in vivo remains poorly understood. To delinea...
ORGANISM(S): Mus musculus 
2015-04-03 | E-GEOD-55248 | biostudies-arrayexpress
UnknownLinkage map construction and QTL mapping for morphological traits in Ipomoea trifida, a diploid sweetpotato relative.
Not available
S-EPMC12445336 | biostudies-literature
ProteomicsAutomating data analysis for hydrogen/deuterium exchange mass spectrometry using data-independent acquisition methodology
We developed an HX-MS2 strategy that supports the acquisition of CID-generated fragment ions alongside their peptide precursors. The approach enables true auto-validation of HX data by mining the rich set of deuterated fragments, using the extra dimension of data to simultaneously confirm the peptid...
ORGANISM(S): Homo sapiens (Human) Oryctolagus cuniculus (Rabbit) 
2023-09-08 | PXD045012 | Pride
Dia Lc-ms Swath-ms Dna-pk Hx-ms 
ProteomicsiTRAQ proteomics of sentinel lymph nodes for the identification of extra cellular matrix protein signatures that can flag metastasis in early breast cancer
Background Breast cancer patients who present in the early stage of disease are affected by metastasis to the axillary group of lymph nodes. The first among this group that is affected is called as sentinel lymph node, and metastasis to this lymph node is crucial for the staging of cancer and the qu...
ORGANISM(S): Homo sapiens (Human) 
2022-05-01 | PXD027668 | Pride
Itraq proteomics Extracellular matrix proteins Early breast cancer Sentinel lymph node metastasis 
TranscriptomicsExpression analysis of superior cervical ganglion from backcrossed TH-MYCN transgenic mice
Neuroblastoma susceptibility in TH-MYN mice is heavily influence by mouse strain background. We have combined linkage analysis of tumor susceptibility with expression QTL analysis of superior cervical ganglia (pure peripheral symptathetic nervous tissue) to identify genes underlying tumor formation...
ORGANISM(S): Mus musculus 
2015-01-30 | E-GEOD-59675 | biostudies-arrayexpress
UnknownUse of a large-bore 088 intracranial access support catheter for delivery of large intracranial devices: case series with the TracStar LDP in 125 cases.
Not available
S-EPMC11671879 | biostudies-literature
ProteomicsMolecular characterization of esophageal squamous cell carcinoma using quantitative proteomics
Esophageal squamous cell carcinoma (ESCC) is a heterogeneous cancer associated with high mortality rate. In India, it is the 6th most common cause of cancer-related mortality. In this study, we employed high-resolution mass spectrometry-based quantitative proteomics to characterize differential prot...
ORGANISM(S): Homo sapiens (Human) 
2023-10-24 | PXD036238 | Pride
Quantitative proteomics Cell cycle regulation Syvn1 Esophageal squamous cell carcinoma Er stress 
UnknownTargeting glioblastoma signaling and metabolism with a re-purposed brain-penetrant drug.
Not available
S-EPMC8856626 | biostudies-literature
ProteomicstRNA binding to KEOPS human protein complex
N6-theronylcarbomyl adenosine (t6A) is a universal tRNA posttranscriptional modification that promotes translation fidelity and is therefore required for the fitness of virtually all living cells. Kae1, the t6A modifying enzyme in eukaryotes and archea, resides within the KEOPS complex with three au...
ORGANISM(S): Homo sapiens (Human) 
2020-12-11 | PXD018007 | Pride
Trna Keops Hx-ms 
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