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ProteomicsExpanding the global map of protein post translational modifications with PTMScan enrichment and nDIA analysis on the Orbitrap Astral
The study describes the use of PTMScan enrichment and LC-MS/MS analysis using Orbitrap Astral for the deep coverage of different PTM peptides from cells and tissue.
ORGANISM(S): Mus musculus (Mouse) Homo sapiens (Human) 
2026-05-21 | PXD065579 | Pride
Ubiquitination Succinylation Ptm Methylation Ptmscan Orbitrap astral Ndia Acetylation Mass spec Dda Phosphorylation 
ProteomicsMS Western, a Method of Multiplexed Absolute Protein Quantification is a Practical Alternative to Western Blotting
Develeopment and application of MS Western method. A new GeLC-MS/MS method is developed for the absolute quantification of proteins.
ORGANISM(S): Bos taurus (Bovine) Danio rerio (Zebrafish) (Brachydanio rerio) Homo sapiens (Human) Oryctolagus cuniculus (Rabbit) Drosophila melanogaster (Fruit fly) Saccharomyces cerevisiae (Baker's yeast) 
2017-12-18 | PXD005654 | Pride
Gelc-ms/ms Absolute quantification 
ProteomicsOptimizing Workflow Efficiency for Analyzing Low Molecular Weight Endogenous Peptides in Colostrum
Endogenous peptides(EPs) were extracted and analysed from colostrum using four distinct peptide extraction methods, previously employed for EPs extraction from other bodily fluids. The efficiency of these methods was systematically compared and analysed to identify the most effective extraction tech...
ORGANISM(S): Bos taurus (Bovine) 
2025-05-06 | PXD051733 | Pride
Bovine Colostrum Endogenous peptides 
ProteomicsMultisystems analysis of Mycobacterium tuberculosis reveals kinase-dependent remodeling of the pathogen-environment interface
Tuberculosis is the leading killer among infectious diseases worldwide. The rise of multi-drug resistance has prompted new approaches for tuberculosis drug development, including inhibition of virulence determinants and of signaling cascades that control many downstream pathways. Here we used a mult...
ORGANISM(S): Mycobacterium tuberculosis 
2018-03-09 | PXD008968 | Pride
Dia Proteomics Phosphoproteomics Systems biology Dda 
UnknownIdentification of Appropriate Reference Genes for qRT-PCR Analysis of Heat-Stressed Mammary Epithelial Cells in Riverine Buffaloes (Bubalus bubalis).
Not available
S-EPMC4393032 | biostudies-literature
ProteomicsEye proteome of Drosophila melanogaster
We report the proteome composition of the Drosophila eye – a compound organ that is highly enriched in membrane proteins. The fly eye is a popular model to study the physiology of vision by means of genetic, pharmacological, and dietary interference.While the eye transcriptome and development-relate...
ORGANISM(S): Drosophila melanogaster (Fruit fly) 
2024-08-09 | PXD044845 | Pride
Eye Gelc-ms/ms Proteomics Drosophila melanogaster 
UnknownPragmatic perspective on conservation genetics and demographic history of the last surviving population of Kashmir red deer (Cervus elaphus hanglu) in India.
Not available
S-EPMC4324630 | biostudies-literature
UnknownTranscriptome Analysis of Circulating PBMCs to Understand Mechanism of High Altitude Adaptation in Native Cattle of Ladakh Region.
Not available
S-EPMC5955995 | biostudies-literature
UnknownOptimizing workflow efficiency for analyzing low molecular weight endogenous peptides in colostrum.
Not available
S-EPMC11403347 | biostudies-literature
TranscriptomicsTranscription profiling of Arabidopsis wild type Col-0 and hsf407 double knock out plants after heat stress
Effect of heat stress on wildtype COL-0 Arabidopsis and hsf4-7 double knock out plants.
ORGANISM(S): Arabidopsis thaliana 
2008-12-31 | E-MEXP-1725 | biostudies-arrayexpress
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