Ltq-orbitrap discovery

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Proteomics (1832)
Unknown (43)
Metabolomics (32)
Multiomics (3)
Other (1)

Organisms

Homo sapiens (1675)
Mus musculus (1675)
Allexis (1674)
Rattus norvegicus (1674)
Shigella (1674)
Shigella flexneri (1674)
Arabidopsis thaliana (1673)
Bos taurus (1673)
Entamoeba histolytica HM-1:IMSS-A (1673)
Escherichia coli (1673)
Leishmania major strain Friedlin (1673)
Listeria monocytogenes (1673)
Medicago truncatula (1673)
Meleagris gallopavo (1673)
Methylohalobius crimeensis 10Ki (1673)
Saccharomyces cerevisiae (1673)
Schizosaccharomyces pombe (1673)
Sinorhizobium meliloti BL225C (1673)
Solanum tuberosum (1673)
Staphylococcus aureus (1673)
Sus scrofa domesticus (1673)
Zea mays (1673)
Callinectes sapidus (1672)
Drosophila melanogaster (1672)
Entamoeba histolytica (1672)
Mycobacterium tuberculosis (1672)
Homo sapiens (28)
Mus musculus (2)
Euphorbia dendroides (1)
Streptomyces roseifaciens (1)

Repository

pride (1675)
MassIVE (112)
PeptideAtlas (43)
GNPS (16)
MetaboLights (16)
PAXDB (2)
jPOST (1)

Tissue

Cell culture (359)
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Large Intestine (6)
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Urine (2)
Plasma Non-glyco (1)

Disease

Disease free (49)
Breast cancer (45)
Colon cancer (35)
Acute leukemia (14)
Melanoma (13)
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Prostate adenocarcinoma (11)
Parkinson's disease (10)
Brain cancer (9)
Lung cancer (9)
Alzheimer's disease (8)
Chagas disease (8)
Malaria (8)
Wounds and Injuries (8)
Brain glioblastoma multiforme (7)
Lymphoma (7)
Malignant neoplasm of ovary (7)
Plasmodium falciparum malaria (6)
Trypanosomiasis (6)
Colorectal Carcinoma (5)
Head and neck squamous cell carcinoma (5)
Lung adenocarcinoma (5)
Non-small cell lung carcinoma (5)
Type 2 diabetes mellitus (5)
Cardiovascular system disease (4)
Glioblastoma (4)
Huntington Disease (4)
Prostate cancer (4)
Giardiasis (3)
Hepatocellular carcinoma (3)

Technology Type

Mass Spectrometry (1675)
Shotgun proteomics (1108)
Affinity purification coupled with mass spectrometry proteomics (281)
Gel-based experiment (193)
Bottom-up proteomics (157)
Data-dependent acquisition (63)
Top-down proteomics (40)
Chemical cross-linking coupled with mass spectrometry proteomics (30)
SRM/MRM (15)
Mass spectrometry (12)
Mass spectrometry imaging (6)
Mass spectrometry assay (4)
Affinity proteomics (3)
All-ion fragmentation (3)
Data-independent acquisition (3)
HDMSE (3)
MSE (3)
SWATH MS (2)
NMR spectroscopy (1)
Gel-free quantification method (1)
Glycoproteomics (1)
Immunopeptidomics (1)
Metaproteomics (1)
Proteogenomics (1)

Instrument Platform

LTQ Orbitrap Velos (62)
LTQ Orbitrap Elite (40)
LTQ Orbitrap (35)
LTQ Orbitrap XL (16)
LTQ Orbitrap Discovery (14)
Q Exactive (11)
LTQ (5)
Orbitrap Fusion (5)
LTQ Orbitrap Discovery (Thermo Scientific) (4)
Liquid Chromatography MS - positive - reverse phase (3)
MicrOTOF-Q II (2)
LTQ Velos (2)
MS:1000031 (2)
Orbitrap Fusion ETD (2)
Q Exactive HF (2)
Direct infusion MS - negative (2)
Direct infusion MS - positive (2)
Liquid Chromatography MS - negative - reverse phase (2)
Thermo LTQ Orbitrap Discovery (1)
LTQ Orbitrap Velos Pro (1)
Orbitrap Exploris 240 (1)
Orbitrap Fusion Lumos (1)
QTRAP 5500 (1)
Mass spectrometry - positive - - LTQ Orbitrap Discovery (Thermo Scientific) (1)
Mass spectrometry - negative - - LTQ Orbitrap Discovery (Thermo Scientific) (1)
Liquid Chromatography MS - positive - reverse phase - LTQ Orbitrap Discovery (Thermo Scientific) (1)
Liquid Chromatography MS - negative - reverse phase - LTQ Orbitrap Discovery (Thermo Scientific) (1)
Liquid Chromatography MS - positive - reverse phase - LTQ Orbitrap Velos (Thermo Scientific) (1)
Liquid Chromatography MS - negative - reverse phase - LTQ Orbitrap Velos (Thermo Scientific) (1)
Liquid Chromatography MS - negative - reverse phase - LTQ-Orbitrap (1)

Publication Date

2018 (201)
2019 (196)
2021 (181)
2020 (165)
2016 (161)
2022 (159)
2017 (157)
2023 (140)
2015 (123)
2025 (91)
2024 (88)
2013 (62)
2026 (60)
2014 (57)
2009 (6)
2012 (2)
2011 (1)

UNIPROT ID/AC

3MG2_ECOLI (2)
3PASE_ECOLI (2)
511145.b2088 (2)
511145.b2394 (2)
511145.b3505 (2)
5DNU_ECOLI (2)
5FCL_ECOLI (2)
6PGL_ECOLI (2)
A2MG_ECOLI (2)
AAAT_ECOLI (2)
AAER_ECOLI (2)
AAS_ECOLI (2)
AAT_ECOLI (2)
ABDH_ECOLI (2)
ACCA_ECOLI (2)
ACCC_ECOLI (2)
ACCD_ECOLI (2)
ACDH_ECOLI (2)
ACEA_ECOLI (2)
ACEK_ECOLI (2)
ACFD_ECOLI (2)
ACKA_ECOLI (2)
ACNA_ECOLI (2)
ACNB_ECOLI (2)
ACPH_ECOLI (2)
ACPS_ECOLI (2)
ACPT_ECOLI (2)
ACP_ECOLI (2)
ACRA_ECOLI (2)
ACRB_ECOLI (2)

ENSEMBL ID

ENSG00000170477 (22)
ENSG00000247315 (15)
ENSG00000147251 (11)
ENSG00000229353 (10)
ENSG00000214897 (2)
ENSG00000204131 (1)

CHEBI ID

CHEBI:27897 (4)
CHEBI:30769 (4)
CHEBI:25307 (3)
CHEBI:70824 (3)
CHEBI:17768 (3)
CHEBI:16742 (3)
CHEBI:22660 (3)
CHEBI:35932 (3)
CHEBI:17405 (3)
CHEBI:48131 (3)
CHEBI:68616 (3)
CHEBI:29016 (3)
CHEBI:70989 (3)
CHEBI:28300 (3)
CHEBI:16695 (3)
CHEBI:18107 (3)
CHEBI:16919 (3)
CHEBI:16914 (3)
CHEBI:17445 (3)
CHEBI:84091|CHEBI:84092 (2)
CHEBI:84107 (2)
CHEBI:19065|CHEBI:68467|CHEBI:70972 (2)
CHEBI:84102 (2)
CHEBI:23628 (2)
CHEBI:84088 (2)
CHEBI:84086 (2)
CHEBI:17069 (2)
CHEBI:68455 (2)
CHEBI:68459 (2)
CHEBI:40813 (2)

Metabolite Name

Methylinosine (2)
Dimethylguanosine (2)
Glucuronic acid (2)
DTDP (2)
DUMP (2)
Quinic acid (2)
Xanthosine (2)
Citric acid (2)
Glu-Val (2)
Tryptophan (2)
PE p18:1/20:4 (1)
PE p18:1/20:2 (1)
PE p18:1/18:1 (1)
PE p18:0/22:6 (1)
PE p18:0/22:5 (1)
PE p18:0/22:4 (1)
PE p18:0/22:1 (1)
PE p18:0/20:4 (1)
PE p18:0/20:3 (1)
PE p18:0/20:2 (1)
PE p18:0/18:1 (1)
PE p16:0/22:6 (1)
PE p16:0/22:3 (1)
PE p16:0/20:4 (1)
PE p16:0/18:1 (1)
PE 17:0/17:0 (1)
Testosterone glucuronide (1)
Dehydroisoandrosterone 3-glucuronide (1)
Chenodeoxyglycocholic acid isomer (1)
DHEA sulfate (1)

Modification

15.994915 (9)
4x(15)N labeled L-arginine (8)
57.021464 (8)
2x(15)N labeled L-lysine (7)
42.010565 (5)
4-tetrahydrothiazine-3-carboxylic acid (4)
Not available (4)
+3amu) (3)
-17.026549 (3)
45.029395 (3)
4x(2)H labeled dimethylated residue (3)
N6-dimethyl-L-lysine (3)
79.966331 (2)
N6 (2)
-18.010565 (1)
0.9840160012245178 (1)
10.008269 (1)
15.994915008544922 (1)
227.126991 (1)
3'' (1)
4x(2)H labeled dimethylated L-lysine (1)
56.026215 (1)
57.02146530151367 (1)
58.005479 (1)
6.020129 (1)
6x(2)H labeled dimethylated L-arginine (1)
9.030194 (1)

Release Date

2012 (8)
2011 (5)
2013 (4)
2021 (3)
2020 (3)
2015 (3)
2022 (2)
2018 (2)
2017 (2)
2010 (2)
2025 (1)
2024 (1)
2023 (1)
2019 (1)
2016 (1)
2014 (1)
2009 (1)
2008 (1)
2006 (1)

Lab affiliation

EDyP (22)
CRUK Beatson Institute (8)
Laboratory of Fungal Pathogenesis, Centre for DNA Fingerprinting and Diagnostics (CDFD), Hyderabad, India (8)
McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University, Baltimore, Maryland 21205 USA (8)
Universität Greifswald Institut für Pharmazie, AG Pharmazeutische Biotechnologie Greifswald, Germany (8)
Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Dr. Aiguader 88, Barcelona 08003, Spain (6)
Chemistry Department, Boston College, USA (6)
Instituto de Biotecnología, Grupo de Bioquímica y Parasitología Molecular, Departamento de Parasitología, Universidad de Granada, Granada, Spain. (6)
Univeristy College Dublin (6)
BioArCh, University of York, UK (5)
Core Facility for Medical Bioanalytics Proteomics Platform Tübingen (PxP) Institute for Ophthalmic Research Eberhard-Karls University of Tuebingen Elfriede-Aulhorn-Str. 7 D-72076 Tuebingen. Germany. (5)
Department of Biomedical Sciences, University of Padova, Italy (5)
IGMM, CNRS, Univ Montpellier, Montpellier, France (5)
IGMM, CNRS, Université de Montpellier, Montpellier, France (5)
UMR 7367 CNRS-UL IMoPA Biopôle de l'Université de Lorraine Campus Brabois-Santé 9 avenue de la forêt de Haye 54505 Vandoeuvre-les-Nancy FRANCE (5)
Biozentrum, University of Basel, 4056 Basel, Switzerland (4)
Chair of Proteomics and Bioanalytics, Technische Universität München, Germany (4)
Department of Biochemistry, Genetics and Immunology, University of Vigo, Spain (4)
Department of Chemistry and Biotechnology, Graduate School of Engineering, University of Tokyo, Bunkyo-ku, Tokyo 113-8656, Japan. (4)
Department of Life Science, National Taiwan University (4)
Institute for Systems Biology (4)
Leibniz Institute of Plant Biochemistry (4)
MICALIS Institute Université Paris Saclay, INRAE, AgroParisTech 78350 Jouy-en-Josas France (4)
Medical Proteomics Unit, Research Department, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok, Thailand (4)
School of Agriculture, Meiji University (4)
BK21 FOUR Community-Based Intelligent Novel Drug Discovery Education Unit, College of Pharmacy and Research Institute of Pharmaceutical Sciences, Kyungpook National University, Daegu 41566, Republic of Korea (3)
Biozentrum, University of Basel, Switzerland (3)
CRG, UPF (3)
Chair of Proteomics and Bioanalytics Technical University of Munich Emil-Erlenmeyer-Forum 5 85354 Freising Germany (3)
Department of Biochemistry and Functional Proteomics, Institute of Biology II, Faculty of Biology and BIOSS Centre for Biological Signalling Studies, University of Freiburg, 79104 Freiburg im Breisgau, Germany (3)

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Annotation of the human adult urinary metabolome and metabolite identification using ultra high performance liquid chromatography coupled to a LTQ-Orbitrap mass spectrometer

This study deals with the annotation of the human adult urinary metabolome and metabolite identification from electrospray-mass spectrometry (ESI-MS) based metabolomics datasets. Metabolite identification was achieved using two complementary approaches: (i) formal identification by matching chromato...

2013-07-26 | MTBLS20 | MetaboLights

Targeted Proteomics of NERD and FLS2 on LTQ-Orbitrap Velos Mass Spectrometer

Targeted proteomics has become increasingly popular recently because of its ability to precisely quantify selected proteins in complex cellular backgrounds. We demonstrate the utility of an LTQ-Orbitrap Velos Pro mass spectrometer in targeted parallel reaction monitoring (PRM) despite its unconventi...

ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress)

2015-12-09 | PXD001119 | Pride

Improving proteome coverage on a LTQ-Orbitrap using design of experiments.

Not available

S-EPMC3145359 | biostudies-literature

Immunodepletion plasma proteomics by tripleTOF 5600 and Orbitrap elite/LTQ-Orbitrap Velos/Q exactive mass spectrometers.

Not available

S-EPMC3817719 | biostudies-literature

Human Placenta profilling LTQ-OrbiTrap

Profilling normal human placantal proteomes using LTQ-OrbiTrap

ORGANISM(S): Homo sapiens (Human)

2015-05-26 | PXD000754 | Pride

Placenta Normal Human C-hpp

LogViewer: a software tool to visualize quality control parameters to optimize proteomics experiments using Orbitrap and LTQ-FT mass spectrometers.

Not available

S-EPMC3221448 | biostudies-literature

Human Placenta profilling LTQ-OrbiTrap

Profilling normal human placantal proteomes using LTQ-OrbiTrap

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2019-06-10 | MSV000083950 | MassIVE

Rapid Characterization of Components in Bolbostemma paniculatum by UPLC/LTQ-Orbitrap MSⁿ Analysis and Multivariate Statistical Analysis for Herb Discrimination.

Not available

S-EPMC6100040 | biostudies-literature

Discovery- and target-based protein quantification using iTRAQ and pulsed Q collision induced dissociation (PQD).

Not available

S-EPMC3321122 | biostudies-literature

BSO and Auranofin Redox ICAT: Dataset of peptide identification results from a Redox ICAT experiment including rawfiles from LTQ-Orbitrap XL

In the current study, we used a mass spectrometry-based redox proteomics approach to test responses of the cysteine (Cys) proteome to selective disruption of the Trx- and GSH-dependent systems. Auranofin (ARF) was used to inhibit Trx reductase without detectable oxidation of the GSH/GSSG couple, and...

ORGANISM(S): Homo sapiens (Human)

2019-11-12 | PXD000353 | Pride

Bso Auranofin Mass spectrometry Redox Icat Proteomics

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