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ProteomicsMass spectrometry of co-immunoprecipitation using Arabidopsis MKIP1-YFP as bait
Arabidopsis thaliana (Arabidopsis) MATURASE K INTERACTING PROTEIN1 (MKIP1) is a plastid-localized, non-canonical member of the starch-branching enzyme family. Here we used co-immunoprecipitation (IP) coupled with proteomics to identify proteins bound to MKIP1 in stably transformed Arabidopsis lines ...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2026-02-10 | PXD060108 | Pride
Arabidopsis Maturase k Lc-ms/ms Co-immunoprecipitation Mkip1 
ProteomicsProteomics of Arabidopsis thaliana leaves after silencing of MKIP1 or uL4c
Arabidopsis thaliana (Arabidopsis) MATURASE K INTERACTING PROTEIN1 (MKIP1) is a plastid-localized, non-canonical member of the starch-branching enzyme family. Inducible silencing of MKIP1 by estradiol-treatment results in pale newly emerged leaves. Here we analysed the proteome of these leaves from ...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2026-02-10 | PXD067382 | Pride
Arabidopsis Lc-ms/ms Dia Ribosome Chloroplast 
OtherRIPseq of AtMKIP1-YFP and AtBE3-YFP in Arabidopsis thaliana
Chloroplast group IIA introns derive from bacterial ribozymes. Their splicing likely requires Maturase K (MatK), which has been largely inaccessible to functional analyses being itself a chloroplast intron-encoded protein. We show that MatK physically interacts with a conserved, essential plastid-lo...
ORGANISM(S): Arabidopsis thaliana 
2026-02-11 | GSE284378 | GEO
GenomicsRIPseq of AtMKIP1-YFP and AtBE3-YFP in Arabidopsis thaliana
RIPseq of AtMKIP1-YFP and AtBE3-YFP in Arabidopsis thaliana
PRJNA1198909 | ENA
ProteomicsSize-exclusion chromatography of soluble chloroplast proteins from Nicotiana tabacum (tobacco)
Maturase K (MatK) is the only splicing factor encoded in the chloroplast genomes of land plants. Here we used a transplastomic Nicotiana tabacum line, in which the plastidial MatK gene is C-terminally tagged with a 3x-HA tag, to conduct size-exclusion chromatography of soluble protein extracts enric...
ORGANISM(S): Nicotiana tabacum (Common tobacco) 
2026-02-10 | PXD069946 | Pride
Maturase k Lc-ms/ms Tobacco Dia Size-exclusion chromatography Chloroplast 
ProteomicsMass spectrometry of co-immunoprecipitation using tobacco Maturase K as bait
Chloroplast group IIA introns derive from bacterial ribozymes. Their splicing likely requires Maturase K (MatK), which has been largely inaccessible to functional analyses being itself a chloroplast intron-encoded protein. Here we used co-immunoprecipitation coupled with proteomics to identify prote...
ORGANISM(S): Nicotiana tabacum (Common tobacco) 
2026-02-10 | PXD060055 | Pride
Lc-ms/ms Tobacco Co-immunoprecipitation Seedilings Chloroplasts 
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