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TranscriptomicsDrosophila OSS cell small RNA libraries
High-throughput sequencing of Drosophila melanogaster small RNAs from OSS cells. total RNA, ~18-26nt RNAs isolated using PAGE, ligation to adapters requires 5' monophosphate and 3' OH For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Page...
ORGANISM(S): Drosophila melanogaster 
2009-06-08 | E-GEOD-15378 | biostudies-arrayexpress
TranscriptomicsImpact of oxidative stress on ascorbate biosynthesis in Chlamydomonas via regulation of the VTC2 gene encoding a GDP-l-galactose phosphorylase
The l-galactose (Smirnoff-Wheeler) pathway represents the major route to l-ascorbic acid (vitamin C) biosynthesis in plants. Arabidopsis thaliana VTC2 and its paralogue VTC5 function as GDP-l-galactose phosphorylases converting GDP-l-galactose to l-galactose-1-P, thus catalyzing the first committed ...
ORGANISM(S): Chlamydomonas reinhardtii 
2012-05-02 | E-GEOD-34826 | biostudies-arrayexpress
UnknownImproving protein hydrolysis and digestibility in Arthrospira platensis biomass through recombinant peptidases (EC 3.4): Opportunities for monogastric animal diets.
Not available
S-EPMC11742843 | biostudies-literature
ProteomicsPATIENTS ANTIBODIES RECOGNIZED TWO ISOENZYMES OF GLYCERALDEHYDE -3P- DESHYDROGENASE OF ECHINOCOCCUS GRANULOSUS s. l. Cloning epitopes and enzymatic analysis in silico
Our group is working identifying antigens from E. granulosus s.l by immune-identification and LC-MS/MS methodologies, CE patient sera recognized antigens expressed by cell line from bovine’s protoscolices E .granulouss G1 (EGPE). The antigenic model from EGPE cells showed more sensitivity for patien...
ORGANISM(S): Echinococcus granulosus group 
2025-11-24 | PXD069559 | Pride
Echinococcus granulosus epitopes Glyceraldehyde -3p- deshydrogenase 
TranscriptomicsThe Role of microRNAs in Neural Stem Cell-supported Endothelial Morphogenesis
MicroRNA microarrays and RNA expression arrays were used to identify functional signaling between neural stem cell progenitor cells (NSPC) and brain endothelial cells (EC) that are critical during embryonic development and tissue repair following brain injury. Mouse neural stem /progenitor cells (N...
ORGANISM(S): Mus musculus 
2011-08-31 | E-GEOD-29759 | biostudies-arrayexpress
ProteomicsMetaproteomic datasets of wheat rhizosphere from saline and non-saline soils
We present metaproteome data from wheat rhizosphere from saline and non-saline soil. For collection and acquisition of metaproteome from wheat rhizosphere under saline and normal conditions, a survey was conducted in regions of Haryana, India. Samples from 65 days old plants (wheat var HD2967) were ...
ORGANISM(S): rhizosphere soil bacteria ensemble 
2024-01-08 | PXD015387 | Pride
Lc msms Normal soil Saline soil Soil microbial proteins Microbiota Metaproteome Wheat rhizosphere 
TranscriptomicsDeep-sequencing of endogenous microRNAs from human endothelial cells exposed to hypoxia and normoxia
Human Umbelical Vein Endothelial Cells (HUVEC) were cultured in vitro and exposed to 1% oxygen or normoxia for 24 hours. Then, small RNA libraries were prepared and sequenced using sequencing-by-ligation technique (Solid3 Plus Sequencer platform). Alignment versus miRBase v14.0 identified >400 diffe...
ORGANISM(S): Homo sapiens 
2012-02-07 | E-GEOD-26497 | biostudies-arrayexpress
ProteomicsReactivity-dependent profiling of RNA 5-methylcytidine dioxygenases
Epitranscriptomic RNA modifications can regulate fundamental biological processes, but we lack approaches to map modification sites and probe writer enzymes. Here we present a chemoproteomic strategy to characterize RNA 5-methylcytidine (m5C) dioxygenase enzymes in their native context based upon me...
ORGANISM(S): Homo sapiens (Human) 
2022-07-16 | PXD029955 | Pride
Rna modification Metabolic rna labeling M5c Human Lc-ms/ms 
Proteomicsin vitro kinase assays Identified of STAT1 phosphorylation sites-mediated LATS2
LATS1/2 are frequently down-regulated or mutated in endometrial cancer (EC), yet their exact role in endometrial tumor progression remains unclear. In this study, we unexpectedly discovered a new function of LATS1/2 in regulating MHC class I expression in EC. Knockout of LATS1/2 in EC cells led to s...
ORGANISM(S): Homo sapiens (Human) 
2024-06-16 | PXD043500 | Pride
In vitro phosphorylation Stat1 Lats2 
UnknownStructural Investigations of the Inhibition of Escherichia coli AmpC β-Lactamase by Diazabicyclooctanes.
Not available
S-EPMC7849013 | biostudies-literature
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