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TranscriptomicsA roadmap of cell-type specific gene expression during late stages of the arbuscular mycorrhiza symbiosis
Arbuscular mycorrhiza (AM) interactions between plants and Glomeromycota fungi primarily support phosphate aquisition of most terrestrial plant species. To unravel cell-type specific gene expression during late stages of Medicago truncatula root colonization by AM fungi, we used genome-wide transcri...
ORGANISM(S): Medicago truncatula 
2013-04-28 | E-GEOD-42747 | biostudies-arrayexpress
TranscriptomicsGene expression data from arbuscular mycorrhizal and phosphate-treated Medicago truncatula roots.
Arbuscular mycorrhiza (AM) interactions between plants and Glomeromycota fungi primarily support phosphate aquisition of most terrestrial plant species. To unravel gene expression in Medicago truncatula root colonization by AM fungi, we used genome-wide transcriptome profiling based on whole mycorrh...
ORGANISM(S): Medicago truncatula 
2011-10-28 | E-GEOD-32208 | biostudies-arrayexpress
ProteomicsSpecimen Inactivation Methods for Proteomics – Comparisons of irradiation, chemical, and heat treatments on downstream serum analyses
Numerous studies have described the efficacy of heat inactivation, gamma irradiation, or treatment with guanidium-based chaotropic salts (e.g. TRIzol®) for pathogen inactivation of biological samples to ensure biosafety and biosecurity. However, the effect of these methods on the greater serum prote...
ORGANISM(S): Macaca mulatta (Rhesus macaque) 
2025-10-13 | PXD062367 | Pride
Dia Inactivation Gamma irradiation Rhesus Serum Trizol Primate 
ProteomicsSuperQuant: a Data Processing Approach to Increase Quantitative Proteome Coverage
SuperQuant is a quantitative proteomics data processing workflow that utilizes fragment ion complementarity to identify multiple co-isolated peptides in tandem mass spectra. Parent ion and label-free quantification method are supported. The performance of the developed approach was tested using dime...
ORGANISM(S): Homo sapiens (Human) 
2015-05-26 | PXD001907 | Pride
Data processing Post-aquisition Hela Complementary ions Lc-msms 
GenomicsMedicago truncatula
A roadmap of cell-type specific gene expression during late stages of the arbuscular mycorrhiza symbiosis
PRJNA182994 | ENA
GenomicsMedicago truncatula
Gene expression data from arbuscular mycorrhizal and phosphate-treated Medicago truncatula roots.
PRJNA147475 | ENA
TranscriptomicsWild-type Lister 427 Bloodstream-form polysome profiles with ZC3H32 knock-down
Ran from polysomes of Lister 427 bloodstream forms, wild-type and a cell line with a double knockout and inducible ZC3H32, grown without tetracycline.
ORGANISM(S): Trypanosoma brucei 
2017-11-24 | E-MTAB-4558 | biostudies-arrayexpress
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