Prm-pasef - OmicsDI

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Proteomics (18)
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Schizosaccharomyces pombe (16)
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Mass Spectrometry (16)
Bottom-up proteomics (8)
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DiaPASEF (1)
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Lanzhou Veterinary Research Institute (2)
Laboratory of Structural Biology and Cell Signalling BIOCEV - Institute of Microbiology, v. v. i., The Czech Academy of Sciences (1)
lih (1)
Laboratory of Human Genetics of Infectious Diseases, Necker Branch, INSERM U1163, Necker Hospital for Sick Children, Paris, France; University of Paris, Imagine Institute, Paris, France; St. Giles Laboratory of Human Genetics of Infectious Diseases, Rockefeller Branch, The Rockefeller University, New York, NY, USA; Department of Pediatrics, Necker Hospital for Sick Children, AP-HP, Paris, France; Howard Hughes Medical Institute, New York, NY, USA (1)
Spiez Laboratory (1)
Key Laboratory of Metabolic Cardiovascular Diseases Research of National Health Commission, Ningxia Key Laboratory of Vascular Injury and Repair Research, Yinchuan, Ningxia 750004, P.R. China (1)
Chemistry Department, University of Illinois Urbana-Champaign (1)
University of South Florida, USA (1)
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Translational Metabolic Laboratory, Department of Human Genetics, Radboudumc, Nijmegen, The Netherlands (1)
Department of Biochemistry, Purdue University, West Lafayette, IN 47907, USA (1)
Department of Molecular Cell Biology, Weizmann Institute of Science, Rehovot, Israel (1)
Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN 55905, USA (1)
Center for Computational and Data-Intensive Science and Engineering, Skolkovo Institute of Science and Technology, Moscow 121205, Russia Segal Cancer Proteomics Centre, Lady Davis Institute, Jewish General Hospital, McGill University, Montreal, Quebec H3T 1E2, Canada; Gerald Bronfman Department of Oncology, Jewish General Hospital, McGill University, Montreal, Quebec H3T 1E2, Canada (1)
IMBA and Medical University of Vienna (1)

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The Parallel Reaction Monitoring-Parallel Accumulation Serial Fragmentation (prm-PASEF) Approach for Multiplexed Absolute Quantitation of Proteins in Human Plasma

In the study reported here, a prm-PASEF approach was used for multiplexed absolute quantitation of proteins in human plasma using isotope-labeled peptide standards for 125 plasma proteins, over a broad (104–106) dynamic range. Optimization of LC and MS parameters, such as accumulation time and coll...

ORGANISM(S): Homo sapiens (Human)

2025-04-30 | PXD028279 | Pride

prm-PASEF and g-dia-PASEF analysis of plasma samples from colorectal cancer and control patients

Quantitative analysis of 10 CRC vs 10 control human plasma samples with the prm-PASEF and g-dia-PASEF acquisition methodes

ORGANISM(S): Homo sapiens (Human)

2023-04-11 | PXD036594 | Pride

Pasef prm dia plasma colorectal cancer

prm-PASEF-Based Quantification and Isomeric Model for Extended Coverage of Human Plasma Lipidome in Parkinson's Disease.

Not available

S-EPMC12613151 | biostudies-literature

Four-dimensional proteomics analysis of human cerebrospinal fluid on a trapped ion mobility mass spectrometer using PASEF

A quadrupole time-of-flight mass spectrometry coupled with a trapped ion mobility mass spectrometer operated in parallel accumulation-serial fragmentation mode has recently emerged as proteome profiling platform capable of providing four dimensional features of elution time, collision cross section...

ORGANISM(S): Homo sapiens (Human)

2023-02-28 | PXD035249 | Pride

4d proteomics And alzheimer’s disease Dda-pasef Csf Diapasef Prm-pasef

An automated workflow based on data independent acquisition for practical and high-throughput personalized assay development and minimal residual disease monitoring in multiple myeloma patients

Minimal residual disease (MRD) status in multiple myeloma (MM) is an important prognostic biomarker. Personalized blood-based targeted mass spectrometry (MS-MRD) detecting M-proteins was shown to provide a sensitive and minimally invasive alternative to MRD assessment in bone marrow. However, MS-MRD...

ORGANISM(S): Homo sapiens (Human)

2025-06-10 | PXD050329 | Pride

Multiple myeloma Dia-pasef Minimal residual disease Multiplexing M-protein

Quantification of 782 Plasma Peptides by Multiplexed Targeted Proteomics.

Not available

S-EPMC10243115 | biostudies-literature

MALDI-TIMS-MS<sup>2</sup> Imaging and Annotation of Natural Products in Fungal-Bacterial Co-Culture.

Not available

S-EPMC12132468 | biostudies-literature

MALDI-TIMS-MS<sup>2</sup> Imaging and Annotation of Natural Products in Fungal-Bacterial Coculture.

Not available

S-EPMC12413305 | biostudies-literature

A Novel Strategy to Rapidly Profile and Quantify High-Risk Host Cell Proteins using Integrated DDA-PRM-dMRM Mode

We developed a novel strategy using integrated DDA-PRM-dMRM to comprehensively profile and quantify high-risk HCPs in CHO cell-derived biotherapeutics. Firstly, we performed deep proteomic analysis of CHO cells using DDA-PASEF mode, constructing a high-quality spectral library covering all potential...

ORGANISM(S): Cricetulus Griseus

PXD063690 |

A High-Throughput Biocatalytic Platform for Screening Isomeric Kainoid Natural Products.

Not available

S-EPMC12633004 | biostudies-literature

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