Sort   by:  
 Page size 
ProteomicsProteome resource allocation in bacteria
A central aim of cell biology is to understand the strategy of gene expression in response to the environment. Here we study gene expression response to metabolic challenges in exponentially growing Escherichia coli using mass spectrometry. Despite enormous complexity in the details of the underlyin...
ORGANISM(S): Escherichia coli 
2015-02-12 | PXD001467 | Pride
Escherichia coli Proteome partition Growth physiology 
UnknownEnhancing Proteome Coverage by Using Strong Anion-Exchange in Tandem with Basic-pH Reversed-Phase Chromatography for Sample Multiplexing-Based Proteomics.
Not available
S-EPMC11090996 | biostudies-literature
ProteomicsThe phenylalanine-and-glycine repeats of NUP98 oncofusions form condensates that selectively partition transcriptional coactivators
Recurrent cancer-causing fusions of NUP98 produce higher-order assemblies known as condensates. How NUP98 oncofusion-driven condensates activate oncogenes remains poorly understood. Here, we investigate NUP98-PHF23, a leukemogenic chimera of the disordered FG-repeats-rich region of NUP98 and the H3K...
ORGANISM(S): Homo sapiens (Human) 
2024-12-31 | PXD056948 | Pride
H3k4me3 Leukemia Histone modification P300 Kmt2/mll Nup98 Wdr5 Fg repeats Condensate Chromatin 
UnknownHow Does Escherichia coli Allocate Proteome?
Not available
S-EPMC11415281 | biostudies-literature
UnknownPyViscount: Validating False Discovery Rate Estimation Methods via Random Search Space Partition.
Not available
S-EPMC11894659 | biostudies-literature
UnknownThe Nuclear Proteome of a Vertebrate.
Not available
S-EPMC4618192 | biostudies-literature
GenomicsProteome-scale quantification of the interactions driving condensate formation of intrinsically disordered proteins
The authors develop Condensate Partitioning by mRNA display (CPmD) to quantify the weak interactions driving the partitioning into, as well as formation of biomolecular condensates by disordered proteins at the proteome scale.
PRJEB113191 | ENA
UnknownQuantification of protein half-lives in the budding yeast proteome.
Not available
S-EPMC1550773 | biostudies-literature
UnknownMetabolic changes associated with the long winter fast dominate the liver proteome in 13-lined ground squirrels.
Not available
S-EPMC4042184 | biostudies-literature
ProteomicsEnhancing proteome coverage by using strong anion exchange in tandem with basic-pH reversed-phase chromatography for sample multiplexing-based proteomics
Sample multiplexing-based proteomic strategies rely on fractionation to improve proteome coverage. Tandem mass tag (TMT) experiments, for example, can currently accommodate up to 18 samples with proteins spanning several orders of magnitude, thus necessitating fractionation to achieve reasonable pro...
ORGANISM(S): Homo sapiens (Human) 
2023-12-28 | PXD044393 | Pride
Faims Tmtpro Eclipse Sax Sps-ms3 Rts 
Sort   by:  
 Page size