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ProteomicsN-terminal and whole-protein profiling on R-catcher-enriched samples
The project involves the purification of Nt-arginylated proteins and their interacting partners in Human cell line HMEC and T-47D. The purification was done with R-catcher.
ORGANISM(S): Homo sapiens (Human) 
2025-09-29 | PXD064220 | Pride
R-catcher Apms N-terminome N-terminal arginylation 
UnknownR-catcher, a potent molecular tool to unveil the arginylome.
Not available
S-EPMC8038991 | biostudies-literature
UnknownCorrection to: R-catcher, a potent molecular tool to unveil the arginylome.
Not available
S-EPMC9172863 | biostudies-literature
UnknownATE1 promotes breast cancer progression via arginylation-dependent regulation of MAPK-MYC signaling.
Not available
S-EPMC12403503 | biostudies-literature
TranscriptomicsProof of principle for iPS2-10X-seq: timecourse experiment during 2D cardiac differentiation
Proof of principle and optimization experiment on 10X-based-iPS2-seq was performed in two experiments: The first explorative experiment (H001AS5) was performed on two batches of hPSC and hPSC-derived cardiomyocytes at day 23 and pooled together. hPSC were not treated with Tetracycline or primed for...
ORGANISM(S): Homo sapiens 
2025-10-27 | E-MTAB-14065 | biostudies-arrayexpress
TranscriptomicsiPS2-10X-seq Neural organoid differentiation
iPS2-10X-seq on Neural organoid differentiation after 35days of differentiation. This experiment is a proof of principle that iPS2seq can be applied to different differentiation strategies without risk of silencing. This experiment also showed how neuro-iPSC clones differentiate preferentially towar...
ORGANISM(S): Homo sapiens 
2025-10-27 | E-MTAB-15308 | biostudies-arrayexpress
TranscriptomicsiPS2-CITE-seq with arrayed polyclonal hiPSC targeting of either SMAD2 or B2M
We transfected hiPSCs WTC11 with specific shRNAs targeting SMAD2 or B2M. hiPSCs transfected were selected, cultured, and four clones were selected per targeting and expanded for follow-up validations. We cultured hiPSC and differentiated them into cardiac organoids for 7.5 days. This experiment allo...
ORGANISM(S): Homo sapiens 
2025-10-27 | E-MTAB-15309 | biostudies-arrayexpress
TranscriptomicsProof of principle for iPS2-10X-seq: cardioids experiment during 3D cardiac differentiation
Proof of principle and optimization experiment on cardioid with10X-based-iPS2-seq was performed on two batches of hPSC-derived cardioids at day 7.5 and pooled together after sample multiplexing. hPSC were primed and treated with Tetracycline 5 days prior cardiac differentiation. CG000388 Rev B (when...
ORGANISM(S): Homo sapiens 
2025-10-27 | E-MTAB-14066 | biostudies-arrayexpress
TranscriptomicsiPS2-sci-sec dataset on hPSC derived cardiomyocytes at day 23
Proof of principle and testing experiments on  iPS2-sci-seq have been performed on two batches of hPSC-derived cardiomyocytes at day 23. Cells have been treated with Tetracycline throughout differentiation. For this experiment it was used a 2-level of indexing sci-RNAseq protocol (Cao J. et. al, Sci...
ORGANISM(S): Homo sapiens 
2025-10-27 | E-MTAB-14102 | biostudies-arrayexpress
ProteomicsAPE1 (apurinic/apyrimidinic endonuclease 1): newly identified post-translational modifications (PTMs)
APE1 (apurinic/apyrimidinic endonuclease 1) is a multifunctional protein essential for both DNA base excision repair and redox signaling. However, its post-translational modifications (PTMs), which are key to modulating its cellular functions, remain largely uncharacterized due to their dynamic and ...
ORGANISM(S): Homo sapiens (Human) 
2026-03-17 | PXD067266 | Pride
Ptms Ape1 Live-cell Lc-ms/ms 
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