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ProteomicsA proteome analysis of freezing tolerance in red clover (Trifolium pratense L.)
Improvement of freezing tolerance of red clover (Trifolium pratense L.) would increase its persistence under cold climate. In this study, we assessed the freezing tolerance and compared the proteome composition of non-acclimated and cold-acclimated plants of two initial cultivars of red clover: Endu...
ORGANISM(S): Trifolium pratense subsp. pratense 
2016-03-15 | PXD003689 | Pride
Red clover  cold acclimation  proteomic analysis  recurrent selection  freezing tolerance  plant abiotic stress. 
ProteomicsAn improved protocol to study the plant cell wall proteome
Cell wall proteins were extracted from alfalfa stems according to a 3-steps extraction procedure using sequentially CaCl2, EGTA and LiCl-complemented buffers. The efficiency of this protocol for extracting cell wall proteins was compared with the 2 previously published methods optimized for alfalfa...
ORGANISM(S): Medicago sativa (Alfalfa) 
2015-04-14 | PXD001927 | Pride
Lc-msms Stem Proteomics 2d-gel electrophoresis Alfalfa Cell wall 
ProteomicsPathogenic leptospires modulate protein expression and post-translational modifications in response to mammalian host signals
A large body of work has demonstrated that leptospires regulate and modify gene expression in response to environmental cues, as encountered during disease transmission, including changes in temperature, osmolarity, concentration of iron, the presence of serum, and interaction with macrophages. Howe...
ORGANISM(S): Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 
2017-08-31 | PXD006995 | Pride
Dige Proteomics Post-translational modifications Spirochetes Leptospira 
ProteomicsSpecialisation events of fungal metacommunities exposed to a persistent organic pollutant are suggestive of augmented pathogenic potential
The impacts of man-made chemicals, in particular of persistent organic pollutants, are multifactorial as they may affect the integrity of ecosystems, alter biodiversity and hinder the health of most organisms. We have demonstrated that the belowground mycobiota of forest soils acts as a buffer again...
ORGANISM(S): environmental samples <Fungi> 
2018-11-28 | PXD009798 | Pride
Biocide Pcp Secreted proteins Lc-ms Carbon and nitrogen metabolisms Pathogenic Metacommunity 
ProteomicsMolecular investigation of Tuscan sweet cherries sampled over three years: gene expression analysis coupled to metabolomics and proteomics
Sweet cherry (Prunus avium L.) is a stone fruit widely consumed and appreciated for its organoleptic properties, as well as its nutraceutical potential. We here investigated the characteristics of six non-commercial Tuscan varieties of sweet cherry maintained at the Regional Germplasm Bank of the CN...
ORGANISM(S): Prunus avium 
2021-06-14 | PXD019468 | Pride
Sweet cherry  tuscany  phenylpropanoid pathway  metabolomics  qpcr  proteomics  functional molecules 
MetabolomicsUntargeted metabolomics sheds light on the secondary metabolism of fungi triggered by choline-based ionic liquids
Fungal secondary metabolites constitute a rich source of yet undiscovered bioactive compounds. Their production is often silent under standard laboratory conditions, but the production of some compounds can be triggered simply by altering the cultivation conditions. The usage of an organic salt - io...
2022-07-15 | MTBLS5072 | MetaboLights
ProteomicsFlax cell wall proteome - A cell wall proteome and targeted cell wall analyses provide novel information on hemicellulose metabolism in flax
Proteomic analyses of four different flax organs/tissues (inner-stem, outer-stem, leaves and roots) enriched in proteins from 3 different sub-compartments (soluble-, membrane-, and cell wall-proteins) was combined with publically available data on flax seed and whole-stem proteins to generate a flax...
ORGANISM(S): linum usitatissimum 
2017-07-19 | PXD005003 | Pride
Lc-msms Cell wall Flax 
MetabolomicsMolecular investigation of Tuscan sweet cherries sampled over three years: gene expression analysis coupled to metabolomics and proteomics

Sweet cherry (Prunus avium L.) is a stone fruit widely consumed and appreciated for its organoleptic properties, as well as its nutraceutical potential. We here investigated the characteristics of six non-commercial Tuscan varieties of sweet cherry maintained at the Regional Germplasm Ba...

2021-10-29 | MTBLS1803 | MetaboLights
TranscriptomicsTranscription profiling of drought treated P.euphratica
Plantlets of P. euphratica (clone B2) were obtained by in vitro culture. After ex vitro acclimation, they were transferred and acclimated to greenhouse conditions and transplanted into 7.5L-pot filled with peat-sand mix (50/50 V/V) and were pruned (following some leaf shedding due to transplantation...
ORGANISM(S): Populus euphratica 
2005-03-01 | E-MEXP-276 | biostudies-arrayexpress
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