Richter G G - OmicsDI

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Unknown (1385)
Proteomics (58)
Transcriptomics (46)
Genomics (22)
Metabolomics (9)
Models (1)

Organisms

Homo sapiens (64)
Mus musculus (26)
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Arabidopsis thaliana (5)
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Euglena gracilis (2)
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unclassified Candidatus Omnitrophota (1)

Repository

pride (57)
biostudies-arrayexpress (52)
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Mass Spectrometry (57)
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Instrument Platform

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2014 (7)
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UNIPROT ID/AC

O75293 (1)
O95257 (1)
P04637 (1)
P24522 (1)
P38936 (1)
Q00987 (1)
Q13315 (1)
Q16539 (1)

CHEBI ID

CHEBI:16919 (3)
CHEBI:30769 (3)
CHEBI:15422 (2)
CHEBI:15428 (2)
CHEBI:15727 (2)
CHEBI:15746 (2)
CHEBI:15891 (2)
CHEBI:15903 (2)
CHEBI:15978 (2)
CHEBI:15996 (2)
CHEBI:16027 (2)
CHEBI:16113 (2)
CHEBI:16335 (2)
CHEBI:16449 (2)
CHEBI:16610 (2)
CHEBI:16695 (2)
CHEBI:16737 (2)
CHEBI:16742 (2)
CHEBI:16761 (2)
CHEBI:17148 (2)
CHEBI:17191 (2)
CHEBI:17239 (2)
CHEBI:17268 (2)
CHEBI:17345 (2)
CHEBI:17361 (2)
CHEBI:17515 (2)
CHEBI:17677 (2)
CHEBI:17768 (2)
CHEBI:16991 (1)
CHEBI:26523 (1)

Metabolite Name

Creatine (3)
3-Methylcrotonylglycine (2)
8-Azaguanine (2)
Adenosine (2)
Arginine (2)
Beta-alanine (2)
Carnosine (2)
Cinncassiol A (2)
Citrate (2)
Creatinine (2)
FAD (2)
Glucose (2)
Glutamate (2)
Glycine (2)
Histidine (2)
Lactate (2)
Lysine (2)
N-acetylputrescine (2)
Neosaxitoxin (2)
Phenylalanine (2)
Proline (2)
Putrescine (2)
Richter (2)
Spermidine (2)
Spermine (2)
Taurine (2)
Taurine (2)
Threonine (2)
Tryptophan (2)
Unknown (2)

IsPrivate

False (1)

Modelling Approach

Ordinary differential equation model (1)

Modification

15.994915 (1)
4-tetrahydrothiazine-3-carboxylic acid (1)
57.021464 (1)

Study type

Transcription profiling by array (26)
RNA-seq of coding RNA (7)
Comparative genomic hybridization by array (4)
RNA-seq of coding RNA from single cells (3)
Methylation profiling by high throughput sequencing (3)
ChIP-seq (2)
Methylation profiling by array (2)
Plant - High-throughput sequencing (1)
RNAi profiling by array (1)
ATAC-seq (1)
DNA-seq (1)
RNA-seq of total RNA (1)

Release Date

2022 (193)
2021 (173)
2023 (141)
2020 (128)
2024 (125)
2025 (114)
2018 (77)
2019 (73)
2017 (69)
2016 (54)
2015 (52)
2014 (52)
2013 (36)
2012 (29)
2011 (28)
2009 (24)
2026 (19)
2010 (16)
2007 (9)
2008 (7)
2003 (5)
2004 (4)
2006 (2)
2002 (2)
2000 (2)
2005 (1)
2001 (1)
1997 (1)

Lab affiliation

The University of Sydney (5)
The University of Melbourne (3)
The University of Sydney, Australia (2)
Universität Greifswald Institut für Pharmazie, AG Pharmazeutische Biotechnologie Greifswald, Germany (2)
2Oncode Institute and Department of Molecular Cancer Research, Center for Molecular Medicine, University Medical Center Utrecht, 3584 CX, Utrecht, The Netherlands. (1)
AG Evolutionäre Genetik der Pflanzen Fak. V - Institut für Biologie und Umweltwissenschaften (IBU) Carl von Ossietzky Universität Oldenburg Carl von Ossietzky-Str. 9-11 26111 Oldenburg (1)
AGH Univeristy (1)
Brain Tumor Translational Targets B067 German Cancer Research Center (DKFZ) Im Neuenheimer Feld 580 69120 Heidelberg Germany Phone: +49 6221 42-4635 (1)
Cancer Proteomics Lab Department of Molecular Cell Biology Weizmann Institute of Science, Rehovot (1)
Cell Biophysics, Nencki Institute, Warsaw, Poland (1)
Center for Cancer Research, Massachusetts General Hospital, Boston MA, USA;Department of Chemistry and Chemical Biology, Harvard University, Cambridge MA, USA. (1)
Center for Plant Molecular Biology (ZMBP) University of Tübingen Tübingen, Germany (1)
Charles Perkins Centre, School of Medical Sciences, University of Sydney, Sydney, Australia. (1)
Competence Center Functional Genomics, Junior Research Group Pathoproteomics, University of Greifswald, 17489 Greifswald, Germany (1)
DZNE - German Center for Neurodegenerative Diseases Munich Neuroproteomics Feodor-Lynen Str. 17 D-81377 Munich Germany (1)
Department of Chemistry, Durham University, Stockton Rd, DH1 3LE, Durham, United Kingdom (1)
Department of Molecular Medicine, University of Padua, via A. Gabelli 63, 35121 Padua, Italy (1)
Department of Oncology-Pathology, Karolinska Institutet and Science for Life Laboratory (1)
Department of Peptide-based Immunotherapy, Institute of Immunology, University and University Hospital Tübingen, Tübingen, Germany (1)
Depatment Biology I (1)
Dept. Oncology Pathology, Karolinska Institutet, and Scilifelab, Stockholm, Sweden (1)
Deputy of the Department of Biophysical Chemistry Head of Space Biochemistry Group Elisa Richter Fellow Representative of Austria and Executive Council Member of the European Astrobiological Network EANA (1)
Dr. Elke Hammer Universitätsmedizin Greifswald Interfakultäres Institut für Genetik und Funktionelle Genomforschung Abteilung für Funktionelle Genomforschung Felix-Hausdorff-Straße 8 17487 Greifswald 17475 Greifswald (Postadresse) Germany (1)
Dr. Elke Hammer Universitätsmedizin Greifswald Interfakultäres Institut für Genetik und Funktionelle Genomforschung Abteilung für Funktionelle Genomforschung Felix-Hausdorff-Straße 8 17487 Greifswald Germany (1)
EDyP (1)
German Cancer Research Center (DKFZ) Heidelberg (1)
Head of Proteomics, Dept of Immunology, University of Oslo and Oslo University Hospital (1)
Helmholtz Centre for Environmental Research - UFZ, Permoserstr. 15, 04318 Leipzig, Germany (1)
Institute of Biochemistry II, Faculty of Medicine, Goethe University Frankfurt, 60590 Frankfurt am Main (1)
Institute of Experimental Hematology, School of Medicine, Technische Universität München, Munich, D-81675, Germany; Max-Planck Institute of Biochemistry, D-82152 Martinsried (1)

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Parallel G-quadruplexes recruit the HSV-1 transcription factor ICP4 to promote viral transcription in herpes virus-infected human cells

G-quadruplexes (G4s) are four-stranded nucleic acid structures abundant at gene promoters. They can adopt several distinctive conformations. G4s have been shown to form in the herpes simplex virus-1 (HSV-1) genome during its viral cycle. Here by cross-linking/pull-down assay we identified ICP4, the ...

ORGANISM(S): Homo sapiens (Human) Human alphaherpesvirus 1

2021-09-10 | PXD024743 | Pride

Biological relevance and therapeutic potential of G-quadruplex structures in the human noncoding transcriptome.

Not available

S-EPMC8053107 | biostudies-literature

Gene expression changes in the female zebrafish (Danio rerio) brain in response to acute exposure to methylmercury

Methylmercury (MeHg) is a potent neurotoxin and endocrine disruptor that accumulates in aquatic systems. Previous studies have shown suppression of hormone levels in both male and female fish, suggesting effects on gonadotropin regulation in the brain. We investigated the gene expression profile in ...

ORGANISM(S): Danio rerio

2010-09-30 | E-GEOD-22662 | biostudies-arrayexpress

Targeting loop adenines in G-quadruplex by a selective oxirane.

Not available

S-EPMC3863998 | biostudies-literature

Clenbuterol exerts antidiabetic activity through metabolic reprogramming of skeletal muscle cells

Activation of the sympathetic nervous system causes pronounced metabolic changes that are mediated by multiple adrenergic receptor subtypes. Systemic treatment with β_2-adrenergic receptor agonists results in multiple beneficial metabolic effects, including improved glucose homeostasis. To...

2022-08-26 | MTBLS467 | MetaboLights

The Herpes Simplex Virus-1 genome contains multiple clusters of repeated G-quadruplex: Implications for the antiviral activity of a G-quadruplex ligand.

Not available

S-EPMC7113899 | biostudies-literature

Efficacy and safety of RGB-02, a pegfilgrastim biosimilar to prevent chemotherapy-induced neutropenia: results of a randomized, double-blind phase III clinical study vs. reference pegfilgrastim in patients with breast cancer receiving chemotherapy.

Not available

S-EPMC6364429 | biostudies-literature

Conformation and stability of intramolecular telomeric G-quadruplexes: sequence effects in the loops.

Not available

S-EPMC3867476 | biostudies-literature

Mapping and characterization of G-quadruplexes in Mycobacterium tuberculosis gene promoter regions.

Not available