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TranscriptomicsTranscriptome analysis of the C. glutamicum deletion mutant of rnc, which encodes an RNase III homolog
The Corynebacterium glutamicum R cgR_1959 gene encodes an endoribonuclease of the RNase III family. Deletion mutant of cgR_1959 (Δrnc mutant) showed an elongated cell shape, and presence of several lines on the cell surface, indicating a required of RNase III for maintaining normal cell morphology ...
ORGANISM(S): Corynebacterium glutamicum 
2016-01-17 | E-GEOD-75080 | biostudies-arrayexpress
ProteomicsThe Nuclear Proteome of a Vertebrate
Despite the nucleus’ central role in multi-cellular biology, it is still poorly understood how the cell’s proteome is partitioned between the nucleus and cytoplasm. This is mostly due to the difficulty of separating the nuclear and cytoplasmic contents and the challenge to comprehensively measure re...
ORGANISM(S): Xenopus laevis (African clawed frog) 
2015-09-17 | PXD001297 | Pride
Nucleus Tmtc Xenopus Multinotchms3 
UnknownMorphological and Transcriptomic Analyses Provide New Insights into Linseed (<i>Linum usitatissimum</i> L.) Seedling Roots Response to Nitrogen Stress.
Not available
S-EPMC12473225 | biostudies-literature
TranscriptomicsGene expression analysis of bovine oocytes with high developmental competence obtained from FSH-stimulated animals
The objective of the study was to analyze the impact of various lenght FSH withdrawal period (coasting) after the last FSH injection on transcriptome changes in in vivo bovine oocytes at the GV stage. Oocytes were collected from super-stimulated animals after 20, 44, 68 and 92 hours of coasting. For...
ORGANISM(S): Bos taurus 
2013-06-21 | E-GEOD-38345 | biostudies-arrayexpress
UnknownAutonomous translational pausing is required for XBP1u mRNA recruitment to the ER via the SRP pathway.
Not available
S-EPMC5056097 | biostudies-literature
UnknownBcl-3 regulates the function of Th17 cells through raptor mediated glycolysis metabolism.
Not available
S-EPMC9500237 | biostudies-literature
ProteomicsBayesian Confidence Intervals for Multiplexed Proteomics Integrate Ion-Statistics with Peptide Quantification Concordance, part 2
This study presents a mathematically rigorous approach that integrates peptide MS-signal and peptide-measurement agreement into an estimation of the true protein ratio and the associated confidence.We call our method BACIQ (Bayesian Approach to Confidence Intervals for protein Quantitation – pronoun...
ORGANISM(S): Homo sapiens (Human) Escherichia coli 
2019-09-30 | PXD012285 | Pride
Baciq Pvalue Proteomics Rnc nucleus Confidence Cytoplasmic Lmb 
TranscriptomicsFine mapping of genome activation in bovine embryos by RNA sequencing
During maternal-to-embryonic transition control of embryonic development gradually switches from maternal RNAs and proteins stored in the oocyte to gene products generated after embryonic genome activation (EGA). Detailed insight into the onset of embryonic transcription is obscured by the presence ...
ORGANISM(S): Bos taurus 
2014-02-09 | E-GEOD-52415 | biostudies-arrayexpress
TranscriptomicsSAGE in Cultured Murine COC During Early Maturation
In cultured cumulus oocyte complexes (COC) FSH induces gene transcription required for germinal vesicle breakdown (GVBD). Experiments were performed to determine the critical period when gene transcription is required for GVBD and identify candidate mRNAs involved. Experiment I: murine COC were cult...
ORGANISM(S): Mus musculus 
2006-08-31 | E-GEOD-5568 | biostudies-arrayexpress
TranscriptomicsComparison of the transcription (coding and lncRNAs) of in vitro cultured bovine SAM-treated blastocysts and non-treated blastocysts
Transcriptome (total RNA) profiling of bovine in vitro cultured expanded blastocysts (EB) comparing control non-treated expanded blastocysts with SAM-treated expanded blastocysts. S-Adenosyl methionine (SAM) is the global methyl donor providing methyl group for variety of biomolecules such as DNA , ...
ORGANISM(S): Bos taurus 
2016-02-29 | E-GEOD-75430 | biostudies-arrayexpress
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