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ProteomicsAnalysis of human and microbial salivary proteomes in children offers insights on the molecular pathogenesis of molar-incisor hypomineralization
The current study aims to characterize the salivary proteome (host proteome and microbiome) in children with MIH, to discover salivary markers indicative of the pathology.
ORGANISM(S): Homo sapiens (Human) 
2022-09-15 | PXD035780 | Pride
Molar incisor hypomineralization (mih) Proteomics Microbiome Saliva Biomarker discovery 
ProteomicsDecoding altitude – activated regulatory mechanisms underlining apple peel coloration and ripening
Apple (Malus domestica Borkh) is an important fruit crop cultivated in a broad range of environmental conditions. Apple fruit, and specifically peel tissue, ripening is a physiological process whose molecular regulatory networks response to different environments are still not sufficiently investiga...
ORGANISM(S): Malus domestica 
2021-09-08 | PXD017037 | Pride
Proteomics Ripening Metabolomics Anthocyanin Peel tissue Apple fruit Altitude 
ProteomicsRevisiting non-coding nature of viroids
Viroids are small circular highly structured pathogens infecting a broad range of plants, caus-ing economic losses. Since their discovery in the 70s, they have been considered as non-coding pathogens. In the last few years the discovery of other RNA entities, similar in terms of size and structure, ...
ORGANISM(S): Nicotiana benthamiana 
2022-02-17 | PXD030755 | Pride
Viroid Non-coding rna Pstvd Mass spectrometry Cirrna Translation 
ProteomicsCellular, molecular and proteomic characteristics of early Hepatocellular carcinoma
Ηepatocellular carcinoma (HCC) accounts for the majority of primary liver cancers. Early de-tection/diagnosis is vital for the prognosis of HCC whereas diagnosis at late stages is associated with very low survival rate. Early diagnosis is based on patient’s 6 month surveillance and use of at least t...
ORGANISM(S): Homo sapiens (Human) 
2023-03-11 | PXD033306 | Pride
Hcc  ctcs  mirnas  proteomics 
ProteomicsProteomic profiling of healthy and SLE isolated B-cells
B cells orchestrate the autoimmune responses in patients with systemic lupus erythematosus (SLE), but broad based B-cell directed therapies only show modest efficacy while attenuating humoral immune responses to vaccines and inducing acquired immunodeficiency. used proteomic and transcriptomic analy...
ORGANISM(S): Homo sapiens (Human) 
2022-08-26 | PXD031389 | Pride
B cells  atr  irf1  dna damage response  systemic lupus erythematosus  autoimmunity  proteomics 
ProteomicsIsolation of repaired chromatin of UVC-irradiated human skin fibroblasts
To further study and understand the DNA damage responses, we developed aniFOUND, a new method for capturing under native conditions the repaired DNA and the proteins associated with it after UVC irradiation. hTert-immortalised human skin fibroblasts were irradiated with 20 J/m2 UVC and the nascent D...
ORGANISM(S): Homo sapiens (Human) 
2021-03-10 | PXD012997 | Pride
Dna damage responses Human fibroblasts Nucleotide excision repair-ner Dna repair Uv-c radiation Mass spectrometry Anifound Chromatin 
ProteomicsThe interactome of the UapA transporter reveals putative new players in anterograde membrane cargo trafficking: ΔartA: UapA-TurboID
Neosynthesized plasma membrane (PM) proteins co-translationally translocate to the ER, concentrate at regions called ER-exit sites (ERes) and pack into COPII secretory vesicles which are sorted to the early-Golgi through membrane fusion. Following Golgi maturation, membrane cargoes reach the late-Go...
ORGANISM(S): Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans) 
2023-11-21 | PXD043944 | Pride
Er-exit  copii  copi  traffic  fungi  a. nidulans Golgi-bypass  uapa  proximity dependent biotinylation  proteomics 
ProteomicsThe interactome of the UapA transporter reveals putative new players in anterograde membrane cargo trafficking: UapA-DYDY TurboID
Neosynthesized plasma membrane (PM) proteins co-translationally translocate to the ER, concentrate at regions called ER-exit sites (ERes) and pack into COPII secretory vesicles which are sorted to the early-Golgi through membrane fusion. Following Golgi maturation, membrane cargoes reach the late-Go...
ORGANISM(S): Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans) 
2023-11-21 | PXD043941 | Pride
Er-exit  copii  copi  traffic  fungi  a. nidulans Golgi-bypass  uapa  proximity dependent biotinylation  proteomics 
ProteomicsThe interactome of the UapA transporter reveals putative new players in anterograde membrane cargo trafficking: UapA Interactome
Neosynthesized plasma membrane (PM) proteins co-translationally translocate to the ER, concentrate at regions called ER-exit sites (ERes) and pack into COPII secretory vesicles which are sorted to the early-Golgi through membrane fusion. Following Golgi maturation, membrane cargoes reach the late-Go...
ORGANISM(S): Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans) 
2023-11-21 | PXD043934 | Pride
Er-exit  copii  copi  traffic  fungi  a. nidulans Golgi-bypass  uapa  proximity dependent biotinylation  proteomics 
ProteomicsChios Mastic Gum Extract Enhances Antioxidant Defense in Zebrafish
Chios mastic gum (CMG), derived from the resin of the Pistacia lentiscus has long been considered a natural remedy in the Mediterranean region. Its anti-inflammatory and an-tioxidant properties have garnered increasing attention from scientists and consumers over recent decades. While substantial ev...
ORGANISM(S): Danio rerio (Zebrafish) (Brachydanio rerio) 
2025-12-22 | PXD070358 | Pride
Chios mastic gum  zebrafish  proteomics  copper-zinc superoxide dismutase  thioredox-in-disulfide reductase  catalase 
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