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ProteomicsInteraction with IP6K1 supports pyrophosphorylation of substrate proteins by the inositol pyrophosphate 5-IP7
HEK293T cells transiently transfected to express either SFB-tagged GFP or SFB-tagged IP6K1 were lysed in NETN buffer (20 mM Tris-HCl, pH 8.0, 100 mM NaCl, 1 mM EDTA, 0.5% Nonidet P-40) containing protease and phosphatase inhibitor cocktails (Merck), at 4 degree C for 60 min. Cell debris were removed...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2023-06-20 | MSV000092218 | MassIVE
ProteomicsAlternative splicing modulation mediated by G-quadruplex structures in MALAT1 lncRNA
MALAT1, an abundant lncRNA specifically localized to nuclear speckles, regulates alternative-splicing (AS). The molecular basis of its role in AS remains poorly understood. Here, we report three conserved, thermodynamically stable, parallel RNA-G-quadruplexes (rG4s) present in the 3’ region of MALAT...
ORGANISM(S): Homo sapiens (Human) 
2022-02-17 | PXD026386 | Pride
Lncrna Alternative splicing G-quadruplex Malat1 Nucleolin 
ProteomicsIdentification of Protein Profile in Muscle Tissue of Threatened Indian walking catfish, Clarias magur (Hamilton 1822)
The proteome of Muscle Tissue of Threatened Indian walking catfish, Clarias magur (Hamilton 1822) was studied to understand muscle protein expressed under abiotic temperature stress. The control samples partial sequence can be accessed by PXD027562 and complete sequence by PXD028115 DOI: 10.6019/PXD...
ORGANISM(S): Clarias magur 
2025-05-13 | PXD029636 | Pride
Walking catfish Fish Clarias magur Proteome Muscle 
ProteomicsIdentification of Proteome Profile in Serum depleted albumin of Indian freshwater teleost, Labeo rohita (Hamilton)
The proteome of Serum depleted albumin of Indian freshwater teleost, Labeo rohita (Hamilton) was studied to understand protein expression.
ORGANISM(S): Labeo rohita (Indian major carp) 
2025-05-13 | PXD028387 | Pride
Freshwater fish Indian major carp Teleost Labeo rohita Fish Peptide Proteome Liquid chromatography mass spectroscopy 
ProteomicsIdentification of Proteome Profile in Serum of Indian freshwater teleost, Labeo rohita (Hamilton)
The proteome of Serum of Indian freshwater teleost, Labeo rohita (Hamilton) was studied to understand protein expression.
ORGANISM(S): Labeo rohita (Indian major carp) 
2025-05-13 | PXD028384 | Pride
Freshwater fish Indian major carp Teleost Labeo rohita Fish Peptide Proteome Liquid chromatography mass spectroscopy 
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