Sort   by:  
 Page size 
TranscriptomicsM. catarrhalis Gene Expression in the Chinchilla Nasopharynx
M. catarrhalis strain O35E.rpsl was inoculated into the nasopharynx of healthy, male adult chinchillas. 24 hours later the nasopharyngeal tissues were extracted and homogenized. Total RNA was extracted from these tissue samples. Subsequently, M. catarrhalis genome directed primers were utilized t...
ORGANISM(S): Moraxella catarrhalis 
2012-04-03 | E-GEOD-13559 | biostudies-arrayexpress
ProteomicsMetaproteomes of phototrophic mats from four soda lakes found in the Cariboo Plateau region of British Columbia, Canada
In this study we used metaproteomics to discern the metabolism and physiology of the microorganisms occurring in the phototrophic mats of four soda lakes in the interior of British Columbia, Canada. Binned and assembled metagenomes were used as the database for protein identification.
ORGANISM(S): Bacteria 
2019-07-29 | PXD011230 | Pride
Soda lakes Cyanobacteria 1d-lc Metaproteome Microbiome Microbial mats Metagenomics Phototrophic Extremophiles Biofilm Metaproteomics Haloalkaline 
ProteomicsMetaproteomics of phototrophic biomats from two soda lakes in the Canadian Rocky Mountains
This data is a case study done in the context of developing methods for assessing the taxonomic composition of microbial communities using metaproteomics. For this study with analyzed phototrophic biomats from two Soda Lakes in the Canadian Rocky Mountains using metaproteomics. For protein identific...
ORGANISM(S): Eukaryota (eucaryotes) Bacteria Archaea Viruses 
2017-05-12 | PXD006343 | Pride
1d-lc Metaproteome Metagenomics Biomass assessment Metaproteomics 
TranscriptomicsIdentification of sigB inhibitors in L. monocytogenes
The extensively studied intracellular pathogen, L. monocytogenes, is an ideal model for identifying small-molecule agents for treating bacterial infections. By selecting specific biological targets in L. monocytogenes, which are common to Gram-positive pathogens, we could extrapolate drug discovery ...
ORGANISM(S): Listeria monocytogenes 10403S 
2011-12-06 | E-GEOD-16887 | biostudies-arrayexpress
TranscriptomicsMedicago truncatula roots. Nodulation vs. Arsenic
Legumes, in interaction with resistant rhizobia, combined both moderate tolerance and accumulation of metal(loids) in roots, with the ability to grow without nitrogen supply (Pajuelo et al., 2011). This quality has attracted attention for phytostabilisation of polluted soils (Reichman, 2007). Physio...
ORGANISM(S): Medicago truncatula 
2014-12-08 | E-MTAB-1723 | biostudies-arrayexpress
Proteomics13C or 15N labeled metaproteome of phototrophic microbial mats from Goodenough soda lake in the Cariboo Plateau region of British Columbia, Canada
In this study, we used 13C and 15N labeled substrates to assess the carbon (C) and nitrogen (N) assimilation by detecting 13C and 15N in proteins from microorganisms in the phototrophic microbial mats in a soda lake on the Cariboo Plateau, British Columbia, Canada. Metagenomic database used for prot...
ORGANISM(S): Cyanobacteria Gammaproteobacteria 
2025-10-22 | PXD059992 | Pride
Microbial ecology Cyanobacteria Carbon assimilation Metaproteome Stable isotope probing Microbial mats Nitrogen assimilation Q exactive plus Protein-sip Metaproteomics Soda lake 
Genomicssoda lake metagenome
Syntrophic acetate oxidation in haloalkaline environments
PRJNA484800 | ENA
TranscriptomicsTranscription profiling of fission yeast with deletion or overexpression of ste11 and changes in gene expression after nitrogen starvation of h plus, h minus, h90fus1 and h90ste11 cells to investigate control of gene expression during early sexual differentiation
Fission yeast cells belong to one of two specialized cell types, M or P. Specific environmental conditions trigger sexual differentiation, which leads to an internal program starting with pheromone signalling between M and P cells, followed by mating, meiosis and sporulation. The initial steps of ...
ORGANISM(S): Schizosaccharomyces pombe 
2006-09-22 | E-TABM-139 | biostudies-arrayexpress
TranscriptomicsComparison of gene expression in M-NM-^TrpaA strain and wild-type strain
The goal of the experiment was to determine the difference in gene expression between the wild-type strain and a strain lacking rpaA (M-NM-^TrpaA). Because gene expression is not at steady-state in the wild-type -- it oscillates with a circadian period -- and we did not know a priori whether it is ...
ORGANISM(S): Synechococcus elongatus PCC 7942 
2013-12-04 | E-GEOD-50919 | biostudies-arrayexpress
UnknownSuppression of Rice Blast by Bacterial Strains Isolated from Cultivated Soda Saline-Sodic Soils.
Not available
S-EPMC7400292 | biostudies-literature
Sort   by:  
 Page size