Trifunctional - OmicsDI

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Unknown (312)
Proteomics (34)
Genomics (9)
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Organisms

Schizophyllum commune H4-8 (19)
Mycobacterium tuberculosis SP7 (19)
Oryza sativa Japonica Group (19)
Candidatus Endoriftia persephonae (19)
Mycobacterium tuberculosis SP10 (19)
Mycobacterium tuberculosis SP13 (19)
Mycobacterium tuberculosis SP22 (19)
Enterobacter ludwigii (19)
Chlamydomonas reinhardtii (19)
Lama (19)
Pyricularia oryzae P131 (19)
Enterococcus mundtii CRL35 (19)
Oncorhynchus tshawytscha (19)
Pseudomonas canadensis (19)
Strongylocentrotus purpuratus (19)
Influenza A virus (A/California/04/2009(H1N1)) (19)
Homo (19)
Pseudomonas aeruginosa PAO1H2O (19)
Human alphaherpesvirus 1 strain 17 (19)
Quercus petraea (19)
Canis lupus (19)
Mycobacterium tuberculosis SP1 (19)
Marchantia polymorpha subsp. ruderalis (19)
Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 (19)
Homo sapiens (13)
Mus musculus (4)
Stenotrophomonas sp. SY1 (1)
Rattus rattus (1)
Panopea abrupta (1)
Staphylococcus aureus (1)

Organisms

Homo sapiens (7)
Bacillus sp. BS (1)
Mus musculus (1)

Repository

pride (19)
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geo (6)
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biostudies-arrayexpress (1)

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Cell culture (9)
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Disease

Pancreatic ductal adenocarcinoma (2)
Cervix carcinoma (2)
Peritoneal carcinomatosis from colorectal and gastric cancer (adenocarcinoma) (1)
Adult hepatocellular carcinoma (1)
Disease free (1)
Acute leukemia (1)

Technology Type

Mass Spectrometry (19)
Shotgun proteomics (8)
Bottom-up proteomics (4)
Gel-based experiment (3)
Affinity purification coupled with mass spectrometry proteomics (3)
Mass spectrometry (2)
Mass spectrometry assay (2)
SWATH MS (2)
Top-down proteomics (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Data-dependent acquisition (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (2)
Liquid Chromatography MS - positive - reverse phase (2)
Liquid Chromatography MS - negative - hilic (2)
Illumina NovaSeq 6000 (1)
Orbitrap Fusion (1)
Q Exactive (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2026 (8)
2025 (6)
2024 (5)
2021 (5)
2023 (4)
2019 (4)
2022 (3)
2017 (2)
2018 (1)
2020 (1)

CHEBI ID

CHEBI:21519 (1)
CHEBI:169991 (1)
CHEBI:88719 (1)
CHEBI:169988 (1)
CHEBI:68078 (1)
CHEBI:169989 (1)
CHEBI:116735 (1)
CHEBI:34486 (1)
CHEBI:28709 (1)
CHEBI:63931 (1)
CHEBI:169995 (1)
CHEBI:134763 (1)
CHEBI:169994 (1)
CHEBI:169993 (1)
CHEBI:169992 (1)
CHEBI:139272 (1)
CHEBI:70819 (1)
CHEBI:137245 (1)
CHEBI:16153 (1)
CHEBI:42280 (1)
CHEBI:61198 (1)
CHEBI:169997 (1)
CHEBI:7959 (1)
CHEBI:68577 (1)
CHEBI:140563 (1)
CHEBI:73337 (1)
CHEBI:2691 (1)
CHEBI:17602 (1)
CHEBI:62254 (1)
CHEBI:13332 (1)

Metabolite Name

Phenol (2)
Tridecanoic acid (2)
Indoxyl sulfate (2)
Benzoic acid (2)
Capric acid (2)
Allantoin (2)
Orotidine (2)
D-Ribulose 5-phosphate (2)
Citraconic acid (2)
Deoxycholic acid (2)
Itaconic acid (2)
Tryptophan (2)
Sarcosine (2)
Salicylic acid (2)
Maltotriose (2)
Malonic acid (2)
L-Tryptophan (2)
Isomaltose (2)
Hexadecanedioic acid (2)
Dihydroxyacetone phosphate (2)
D-Ribose 5-phosphate (2)
Adipic acid (2)
Methylmalonic acid (2)
Myristic acid (2)
Indolelactic acid (2)
Taurine (2)
L-Phenylalanine (2)
L-Glutamine (2)
L-Alanine (2)
L-Threonine (2)

First Public Date

2019 (3)
2026 (2)
2024 (1)
2023 (1)
2020 (1)
2017 (1)

Study status

Completed (1)

Study type

RNA-seq of coding RNA (1)
Interventional (1)

Release Date

2025 (36)
2022 (36)
2024 (29)
2023 (26)
2021 (25)
2020 (22)
2019 (22)
2018 (18)
2017 (14)
2015 (13)
2016 (12)
2013 (10)
2026 (8)
2014 (7)
2012 (7)
2010 (7)
2009 (7)
2011 (5)
2005 (2)
2003 (2)
2004 (1)
2002 (1)
2000 (1)
1998 (1)
1991 (1)

Lab affiliation

Section of Infection and Immunity, Herman Ostrow School of Dentistry, University of Southern California (2)
Mass Spectrometry for Biology Unit, CNRS USR 2000, Institut Pasteur, Paris, France. (1)
Proteomics Core Facility Biozentrum, University of Basel Spitalstrasse 41 CH - 4056 Basel Switzerland (1)
State Key Laboratory for Quality Ensurance and Sustainable Use of Dao-di Herbs, Artemisinin Research Center, and Institute of Chinese Materia Medica, China Academy of Chinese Medical Sciences (1)
Department of Clinical and Molecular Medicine, Norwegian University of Science and Technology, N-7006 Trondheim, Norway (1)
Department of Chemical Physiology and Biochemistry Oregon Health & Science University Portland, OR, USA. (1)
Department of Oncology-Pathology (OnkPat) (lab head) (1)
Genomics Research Center, Academia Sinica, Taipei, Taiwan. Drug Development Center, China Medical University, Taichung, Taiwan. Department of Biological Chemistry, University of California, Irvine. (1)
Stephan A. Sieber, Center for Integrated Protein Science at the Department of Chemistry, Technische Universitä¤t München, Garching b. München 85747, Germany; Chair of Organic Chemistry II, Technische Universität München, Garching b. München 85747, Germany (1)
Department of Translational Medicine (DiMeT), Center for Translational Research on Autoimmune & Allergic Diseases - CAAD, University of Piemonte Orientale (1)
Departments of Pediatrics and Systems Pharmacology and Translational Therapeutics, the Raymond and Ruth Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA. (1)
Toronto General Hospital, University of Toronto, Toronto, Canada (1)
Technische Universität München Department of Chemistry Lehrstuhl Organische Chemie II Lichtenbergstr. 4 85747 Garching (bei München) (1)
Professor of Chemical Physiology and Biochemistry, School of Medicine at OHSU Chair, Chemical Physiology and Biochemistry, School of Medicine Helen Jo Whitsell Dean's Leadership Professor Graduate Program in Biomedical Sciences, School of Medicine (1)
Helen Jo Whitsell Endowed Professor and Chair Department of Chemical Physiology and Biochemistry, OHSU, Portland OR, USA (1)
TUM School of Natural Sciences, Department Biosciences, Chair of Organic Chemistry II, Center for Functional Protein Assemblies (CPA), Technical University Munich (TUM), Ernst-Otto-Fischer Str. 8, Garching, 85748, Germany (1)
Analytical Biochemistry and Proteomics Unit. Institut Pasteur de Montevideo e IIBCE (1)
Aarhus University, Denmark (1)

Location

Germany (1)

Keyword

Catumaxomab (1)

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Identification of metabolites of trifunctional sphingomyelin (TFSM1) in HeLa 229 cells infected with Chlamydia trachomatis

Chlamydia trachomatis is an obligate intracellular bacterial pathogen and a leading cause of sexually transmitted infections worldwide. During its biphasic developmental cycle, infectious, non-replicative elementary bodies alternate with replicative reticulate bodies within a membrane-bound intra...

2026-08-10 | MTBLS15303 | MetaboLights

Trifunctional PIP3 binder identification

Trifunctional PIP3 is a chemically modified derivate of PIP3 that includes 3 functionalized groups allowing spacial an temporal manipulation of its release and function. A caged group allows for timed release of the coumpound, a cross-linking group induces covalent binding to binders, while a clicka...

ORGANISM(S): Homo sapiens (Human)

2025-02-19 | PXD025903 | Pride

Trifunctional lipid derivatives: PEs mi-tochondrial interactome

In this study, we employed chemically synthesized trifunctional lipid probes to identify putative protein partners that interact with lipids in HeLa cells. These probes incorporate three distinct chemical functionalities. First, a coumarin-based “caging” moiety is added to the lipid head group, whic...

ORGANISM(S): Homo sapiens (Human)

2025-01-21 | PXD059960 | Pride

Phosphatidic-acid Trifunctional lipid Phospholipid Phosphatidylinositol Phosphatidylethanolamine Lipid interactome

Cryo-EM structure of human mitochondrial trifunctional protein.

Not available

S-EPMC6142257 | biostudies-literature

Tumor targeting, trifunctional dendritic wedge.

Not available

S-EPMC4306510 | biostudies-literature

Mitochondrial trifunctional protein deficiency due to HADHB gene mutation in a Chinese family.

Not available

S-EPMC5471393 | biostudies-literature