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TranscriptomicsTranscriptome Analysis of KSHV virions produced from BCBL1 and BAC36 in 293L cells
The objective of this study was to identify the viral transcripts packaged into the virion particles produced from BCBL1 cells as well as virions from 293L cells containing BAC36 BACs RNA from virions were extracted and analyzed by RNA sequencing
ORGANISM(S): Human herpesvirus 8 
2014-10-16 | E-GEOD-62343 | biostudies-arrayexpress
ProteomicsLC-MS/MS analyses of purified virions of influenza A and B viruses, grown in a range of hosts.
LC-MS/MS analyses of purified virions of influenza A and B viruses, grown in a range of hosts. Described in Hutchinson et al. 'Conserved and host-specific features of influenza virion architecture.'
ORGANISM(S): Bos Taurus (ncbitaxon:9913) Canis Familiaris (canine) Influenza Viruses Gallus Gallus (ncbitaxon:9031) 
2014-06-16 | MSV000078740 | MassIVE
ProteomicsProteomic analysis of Mason-Pfizer monkey virus virions
To accomplish their replication cycle, retroviruses rely heavily on a wide variety of cellular proteins and enzymes, such as helicases. Among these, the DExD-box and DEAH/RHA-box helicases were identified to play crucial roles in their nucleic acid metabolism. This study explores the Betaretrovirus ...
ORGANISM(S): Mason-Pfizer monkey virus 
2024-09-13 | PXD046672 | Pride
Mason-pfizer monkey virus Dhx15 G-patch domain Hek 293 Lc-ms/ms 
ProteomicsThe conserved set of host proteins incorporated into HIV-1 virions suggests a common egress pathway in multiple cell types
HIV-1 incorporates a large array of host proteins into virions. Determining the host protein composition in HIV virions has technical difficulties, including co-purification of microvesicles. We developed an alternative purification technique using cholesterol that differentially modulates the densi...
ORGANISM(S): Homo sapiens (Human) Human immunodeficiency virus 1 
2013-08-02 | PXD000064 | Pride
Hiv-1 Virions Dm Mdm Lc-ms/ms 
ProteomicsMS-based proteomic characterization of pacmanvirus lostcity virions
The microbial sampling of submarine hydrothermal vent remains challenging, with even fewer studies focused on viruses. Here we report the first isolation of a eukaryotic virus from the Lost City hydrothermal field, by co-culture with the laboratory host Acanthamoeba castellanii. This virus, named pa...
ORGANISM(S): Asfarviridae Acanthamoeba castellanii str. Neff 
2025-05-07 | PXD054858 | Pride
Purified virions Pacmanviruses Giant viruses Hydrothermal field Nanolc-ms/ms 
GenomicsTotal RNA-seq analysis of WT and Gag chimera HIV-1 virions
Total RNA-seq analysis of WT and Gag chimera HIV-1 virions
PRJNA1150144 | ENA
ProteomicsMass spectrometry analysis of purified virions of Rhodobacter microvirus Ebor
Single-stranded DNA bacteriophages of the Microviridae family are emerging as major components of the global virosphere, found abundantly across diverse habitats. We have identified and thoroughly characterized a new type of microvirus, Ebor, which infects the freshwater mixotrophic model bacterium ...
ORGANISM(S): Rhodobacter Phage Ebor 
2024-05-06 | MSV000094685 | MassIVE
GenomicsCLIP-seq analysis of WT and Gag chimera HIV-1 virions 1
CLIP-seq analysis of WT and Gag chimera HIV-1 virions 1
PRJNA1183833 | ENA
GenomicsCLIP-seq analysis of WT and Gag chimera HIV-1 virions 2
CLIP-seq analysis of WT and Gag chimera HIV-1 virions 2
PRJNA1183843 | ENA
GenomicsCLIP-seq analysis of WT and Gag chimera HIV-1 virions 3
CLIP-seq analysis of WT and Gag chimera HIV-1 virions 3
PRJNA1183839 | ENA
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