Wang Wang W - OmicsDI

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Unknown (107670)
Transcriptomics (2875)
Proteomics (1883)
Genomics (502)
Metabolomics (221)
Multiomics (15)
Models (4)
Other (4)
Genomic (2)

Organisms

Homo sapiens (1936)
Mus musculus (923)
Arabidopsis thaliana (166)
Rattus norvegicus (144)
Caenorhabditis elegans (42)
Zea mays (37)
Oryza sativa (37)
Drosophila melanogaster (36)
Rattus rattus (29)
Danio rerio (28)
Saccharomyces cerevisiae (28)
Gallus gallus (27)
Sus scrofa (25)
Oryza sativa Japonica Group (20)
Glycine max (19)
Escherichia coli (19)
Macaca mulatta (11)
Triticum aestivum (11)
Shewanella piezotolerans WP3 (9)
Daphnia pulex (9)
Solenopsis invicta (8)
Oryza sativa Indica Group (7)
Listeria monocytogenes (7)
Gossypium hirsutum (6)
Vitis vinifera (6)
Salmonella enterica subsp. enterica serovar Typhimurium (6)
Ovis aries (6)
Bombyx mori (5)
Citrus sinensis (5)
cellular organisms (3)

Organisms

Bahaba taipingensis (5)
Vitis pseudoreticulata (4)
Mus musculus (2)
Homo sapiens (2)
Escherichia coli W (1)
Arabidopsis thaliana (1)

Repository

biostudies-arrayexpress (3188)
pride (1068)
iProX (627)
MetaboLights (210)
EGA (171)
PeptideAtlas (86)
MassIVE (74)
ENA (19)
jPOST (14)
GNPS (11)
PanoramaPublic (10)
BioModels (4)
PAXDB (4)
GPMDB (3)
dbGaP (2)
geo (2)

Tissue

Cell culture (288)
Epithelial cell (79)
Brain (77)
Liver (58)
Leaf (46)
Liver (44)
Plant cell (39)
Permanent cell line cell (36)
Lung (31)
Whole body (30)
Kidney (27)
Blood plasma (25)
Heart (21)
Root (20)
Testis (20)
Blood cell (19)
Blood serum (18)
Stem cell (18)
Cell suspension culture (16)
Colon (16)
Hepatocyte (16)
Blood (15)
B cell (14)
Skin (13)
Bone marrow (12)
Fibroblast (12)
Primary cell (12)
Others (7)
Male Reproductive System (2)
Plasma Non-glyco (2)

Disease

Disease free (30)
Acute leukemia (20)
Breast cancer (18)
Colon cancer (12)
Prostate adenocarcinoma (12)
Cervix carcinoma (10)
Hepatocellular carcinoma (7)
Lung cancer (7)
Normal (6)
Alzheimer's disease (3)
Not Available (3)
Prostate cancer (2)
Lymph node-negative breast cancer (1)
HPV positive (1)
Papillary renal cell carcinoma (1)
MAS (1)
Endometrioid carcinoma (1)
Benign nevi (1)
Mitochondrial disease (1)
Kaposi's sarcoma (1)
AIDS-KS, HIV+, nodular (late) stage (1)
"hepatocellular adenoma" (1)
Malignant fibrous histiocytoma (1)
Osteocytes/osteoblasts (1)
Osteosarcoma (1)
SS2-infected (1)
Normal (1)
Leiomyosarcoma (1)
Acute promyelocytic leukemia (1)
Osteosarcoma (1)

Technology Type

Mass Spectrometry (1068)
Shotgun proteomics (622)
Mass spectrometry (177)
Bottom-up proteomics (128)
Affinity purification coupled with mass spectrometry proteomics (90)
Gel-based experiment (79)
Data-dependent acquisition (70)
Top-down proteomics (47)
SWATH MS (35)
Data-independent acquisition (26)
Mass spectrometry assay (20)
Chemical cross-linking coupled with mass spectrometry proteomics (20)
NMR spectroscopy (15)
Illumina HiSeq 2500 (2)
Illumina HiSeq 2000 (2)
Illumina CytoSNP, Illumina HumanOmni2.5, ILLUMINA, Illumina 450k, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000, Illumina Infinium HumanMethylation450 BeadChip, Affymetrix expression array, ILLUMINA (1)
Illumina MiSeq, ILLUMINA (1)
CAPILLARY, AB 3730xL Genetic Analyzer (1)
Illumina MiSeq, Illumina Genome Analyzer IIx (1)
Illumina HiSeq 2000, Illumina MiSeq (1)
Affymetrix_250K(Nsp) - gtype (1)
Illumina Genome Analyzer IIx, Illumina HiSeq 2000 (1)
Affymetrix_U133v2, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000, Illumina Genome Analyzer IIx (1)
AB SOLiD 4 System, Illumina HiSeq 2500, Illumina HiSeq 2000, AB SOLiD System 3.0 (1)
AB SOLiD 4 System (1)
Affymetrix 6.0 (1)
Illumina HiSeq 2000, Illumina_2.5M (1)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)

Instrument Platform

Illumina HiSeq 2000 (45)
Illumina HiSeq 2500 (42)
Illumina HiSeq 4000 (41)
Illumina NovaSeq 6000 (37)
NextSeq 500 (21)
Agilent 2100 Bioanalyzer (13)
Illumina MiSeq (11)
NextSeq 2000 (7)
NextSeq 550 (7)
Ribo-Zero Gold (Illumina) (5)
TruSeq Stranded Total RNA Library Prep Kit with Ribo-Zero Gold (Illumina) (4)
Illumina Genome Analyzer II (4)
Agilent G2565BA (3)
ScanArray 5000 [PerkinElmer] (3)
DNBSEQ-G400 (3)
BGISEQ-500 (3)
HiSeq X Ten (3)
Illumina HiSeq 1500 (3)
Illumina HiSeq 3000 (3)
GeneChip Instrument System (2)
Affymetrix mouse gene 1.0 ST arrays (2)
BD FACSAria III (2)
Retsch MM400 (2)
Illumina Genome Analyzer (2)
GenePix 4000B [Axon Instruments] (2)
Illumina NovaSeq X (2)
NA (2)
Illumina HiSeq 2000 platform (1)
NEBNext Ultra II Directional RNA Library Prep Kit, Agilent Bioanalyzer 2100 (1)
TRIzol reagent kit, NanoDrop 2000 spectrophotometer (1)

Publication Date

2014 (501)
2013 (485)
2015 (421)
2012 (367)
2016 (325)
2022 (307)
2011 (305)
2010 (283)
2023 (259)
2025 (251)
2021 (250)
2024 (191)
2019 (174)
2020 (161)
2026 (143)
2008 (127)
2009 (103)
2018 (100)
2017 (84)
2005 (66)
2007 (45)
2006 (25)
2004 (12)
2002 (1)
2001 (1)

UNIPROT ID/AC

Q9NQ66 (1)
P29992 (1)
2711.XP_006464469.1 (1)
2711.XP_006464485.1 (1)
2711.XP_006464486.1 (1)
2711.XP_006465039.1 (1)
2711.XP_006465481.1 (1)
2711.XP_006465554.1 (1)
2711.XP_006465598.1 (1)
2711.XP_006465717.1 (1)
2711.XP_006465764.1 (1)
2711.XP_006466032.1 (1)
2711.XP_006466189.1 (1)
2711.XP_006466240.1 (1)
2711.XP_006466243.1 (1)
2711.XP_006466346.1 (1)
2711.XP_006466347.1 (1)
2711.XP_006466348.1 (1)
2711.XP_006466352.1 (1)
2711.XP_006466586.1 (1)
2711.XP_006467060.1 (1)
2711.XP_006467330.1 (1)
2711.XP_006467511.1 (1)
2711.XP_006468195.1 (1)
2711.XP_006468459.1 (1)
2711.XP_006468477.1 (1)
2711.XP_006468930.1 (1)
2711.XP_006468931.1 (1)
2711.XP_006469038.1 (1)
2711.XP_006469071.1 (1)

ENSEMBL ID

ENSG00000170477 (10)
ENSG00000247315 (5)
ENSMUSG00000057465 (5)
ENSMUSG00000072849 (5)
ENSG00000147251 (4)
ENSG00000214897 (2)
ENSG00000229353 (2)
ENSG00000204131 (1)
ENSMUSG00000076586 (1)
ENSMUSG00000076591 (1)
ENSMUSG00000076695 (1)
ENSMUSG00000094546 (1)
ENSMUSG00000094652 (1)
ENSMUSG00000094930 (1)
ENSMUSG00000096833 (1)
ENSMUSG00000098814 (1)
ENSMUSP00000141097 (1)

CHEBI ID

CHEBI:57704 (1)
CHEBI:873 (1)
CHEBI:62321 (1)
CHEBI:7402 (1)
CHEBI:89951 (1)
CHEBI:40559 (1)
CHEBI:4108 (1)
CHEBI:62214 (1)
CHEBI:3596 (1)
CHEBI:4105 (1)
CHEBI:27421 (1)
CHEBI:46951 (1)
CHEBI:699 (1)
CHEBI:94796 (1)
CHEBI:84839 (1)
CHEBI:42802 (1)
CHEBI:58708 (1)
CHEBI:58709 (1)
CHEBI:58710 (1)
CHEBI:5745 (1)
CHEBI:9825 (1)
CHEBI:58642 (1)
CHEBI:47928 (1)
CHEBI:814 (1)
CHEBI:58445 (1)
CHEBI:70959 (1)
CHEBI:6864 (1)
CHEBI:6306 (1)
CHEBI:6223 (1)
CHEBI:646 (1)

Metabolite Name

Hypoxanthine (48)
Adenosine (44)
Guanosine (43)
Uridine (43)
Adenine (41)
Xanthine (39)
L-Tyrosine (39)
L-Phenylalanine (38)
Inosine (38)
Uracil (37)
Taurine (37)
Citric acid (36)
Creatinine (34)
Cytidine (33)
Glycine (32)
L-Tryptophan (32)
L-Histidine (30)
Guanine (30)
Creatine (30)
Uric acid (29)
L-Arginine (28)
Cholic acid (28)
Palmitic acid (28)
Thymidine (28)
Benzoic acid (27)
L-Proline (26)
Fumaric acid (26)
Thymine (25)
Choline (25)
Cytosine (25)

First Public Date

2026 (5)
2025 (3)
2024 (3)
2014 (2)
2023 (1)
2020 (1)
2019 (1)
2018 (1)
2015 (1)
2012 (1)

Modelling Approach

Ordinary differential equation model (2)
Other (1)
Constraint-based model (1)

Lab affiliation

Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA., Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA (15)
Associate Member, St. Jude Faculty Developmental Neurobiology St. Jude Children's Research Hospital Memphis, TN-38105 (10)
Alkali Soil Natural Environmental Science Center, Northeast Forestry University, Key Laboratory of Saline-alkali Vegetation Ecology Restoration in Oil Field, Ministry of Education, Harbin 150040, China (4)
Beijing proteome research center (4)
Department of Structural Biology and Developmental Neurobiology, Center for Proteomics and Metabolomics, St. Jude Children's Research Hospital, Memphis, TN 38105, USA (4)
Experimental Radiation Oncology, MD Anderson Cancer Center, Houston, TX, USA (4)
Institute of Biophysics, Chinese Academy of Sciences (4)
Peking University (4)
The Second Hospital of Dalian Medical University (4)
University of Science and Technology of China (4)
Cleveland Clinic Lerner Research Institute Cardiovascular and Metabolic Sciences (3)
Department of Chemistry and Chemical Biology, Harvard University (3)
Diabetes and Circadian Rhythms Department, Nestlé Institute of Health Sciences, CH-1015 Lausanne, Switzerland (3)
Fujian Agriculture and Forestry University (3)
Genomics Research Center, Academia Sinica, Taipei, 11529 Taiwan (3)
Head of System Biology Lab. at Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Russia (3)
Institute for Cardiovascular Regeneration, Centre for Molecular Medicine, Goethe University Frankfurt am Main, Germany (3)
Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences, National Key Laboratory of Medical Molecular Biology & Department of Immunology, No 5 Dongdan Santiao, Dongcheng district, Beijing 100005, China (3)
Jinan University (3)
National Key Laboratory of Medical Molecular Biology & Department of Immunology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences, 5 Dong Dan San Tiao, Dongcheng District, Beijing 100005, China. (3)
Shandong University (3)
Shanghai Institute of Hematology, State Key Laboratory of Medical Genomics, Collaborative Innovation Center of Hematology, National Research Center for Translational Medicine at Shanghai, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai 200000, China (3)
Shenzhen People’s Hospital (3)
State Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, No.1 West Beichen Rd., Beijing 100101, China. (3)
State Key Laboratory of Proteomics, National Center for Protein Sciences Beijing, Beijing Proteome Research Center, Beijing Institute of Radiation Medicine, Beijing 102206, China (3)
State Key Laboratory of Reproductive Medicine, Nanjing Medical University (3)
Sun Yat-sen University (3)
wuhan union hospital (3)
1. Department of Biochemistry and Molecular Cell Biology, State Key Laboratory of Oncogenes and Related Genes, Shanghai Key Laboratory for Tumor Microenvironment and Inflammation, Key Laboratory of Cell Differentiation and Apoptosis of Chinese Ministry of Education, Shanghai Jiao Tong University School of Medicine. (2)
Beijing Friendship Hospital, Capital Medical University (2)

IsPrivate

False (4)

Submitter Keywords

FAIR-AIML (1)
Machine Learning Model (1)

Classification

bacteria (1)

Modification

15.994915 (5)
57.021464 (5)
71.037114 (3)
4-tetrahydrothiazine-3-carboxylic acid (2)
4x(2)H labeled dimethylated L-lysine (2)
N6 (2)
2x(15)N labeled L-lysine (1)
4x(15)N labeled L-arginine (1)
N6-dimethyl-L-lysine (1)
Not available (1)

Study type

Transcription profiling by array (1785)
RNA-seq of coding RNA (585)
ChIP-seq (233)
RNA-seq of non coding RNA (93)
Comparative genomic hybridization by array (87)
Methylation profiling by array (72)
Methylation profiling by high throughput sequencing (70)
Other (49)
Unknown experiment type (22)
Transcription profiling by tiling array (18)
RNA-seq of coding RNA from single cells (18)
ChIP-chip by tiling array (17)
ChIP-chip by array (14)
Genotyping by array (14)
MicroRNA profiling by array (12)
Animal - High-throughput sequencing (10)
Transcription profiling by RT-PCR (10)
RNA-seq of total RNA (10)
DNA-seq (9)
Cell line - High-throughput sequencing (7)
Transcription profiling by SAGE (6)
High-throughput sequencing (4)
ATAC-seq (4)
RNAi profiling by array (3)
CLIP-seq (3)
Hi-C (3)
RIP-seq (3)
Genotyping by high throughput sequencing (3)
MeDIP-seq (2)
Animal - One-color microarray (2)

Release Date

2025 (16980)
2022 (15064)
2023 (13434)
2024 (12936)
2021 (11254)
2020 (8175)
2019 (5899)
2018 (5003)
2017 (4198)
2016 (3677)
2015 (3146)
2014 (2483)
2026 (2323)
2013 (1794)
2012 (1322)
2011 (968)
2010 (748)
2009 (491)
2008 (354)
2007 (177)
2006 (133)
2005 (132)
2004 (53)
2002 (31)
2003 (29)
2001 (21)
2000 (10)
1999 (10)
1998 (7)
1997 (2)

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Deep proteomic and phosphoproteomic profiling of neuroblastoma treated with XPO1 inhibitor Selinexor

Neuroblastoma accounts for 15% of cancer-related deaths in children, highlighting an unmet need for novel therapies. Selinexor is a small molecule inhibitor of XPO1 that shuffles cargo proteins with a nuclear export sequence, many of which are essential for cancer growth and cell maintenance, from t...

ORGANISM(S): Homo sapiens (Human)

2023-03-11 | PXD026454 | Pride

Identification of Alkaloids from Corydalisyanhusuo W. T. Wang as Dopamine D₁ Receptor Antagonists by Using CRE-Luciferase Reporter Gene Assay.

Not available

S-EPMC6222624 | biostudies-literature

Deep proteomic and phosphoproteomic profiling of DIPG responses to radiation therapy

Different DIPG tumor models have different responses to radiation therapy, which can be identified by quantitative proteomics/phospho-proteomics approach

ORGANISM(S): Homo sapiens (Human)

2024-05-21 | PXD028285 | Pride

Cancer Radiation therapy Phosphoproteome Dipg Proteome

The complete chloroplast genome sequence of Aconitum austroyunnanense W. T. Wang (Ranunculaceae): a medicinal plant endemic to China.

Not available

S-EPMC7748539 | biostudies-literature

Cytotoxicity-guided isolation of elatostemanosides I-VI from <i>Elatostema tenuicaudatum</i> W. T. Wang and their cytotoxic activities.

Not available

S-EPMC11970508 | biostudies-literature

Response to comments on our article (Yin YL et al., Parasit Vectors, 10.1186/s13071-021-04739-w) by Yuqing Wang and colleagues.

Not available

S-EPMC8456634 | biostudies-literature