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ProteomicsYang: Site-specific mapping and quantification of protein S-sulfenylation in cells
The files in this archive represent the supporting data for "Site-specific mapping and quantification of protein S-sulfenylation in cells," a paper to appear in Nature Communications (2014). The authors are Jing Yang, Vinayak Gupta, Kate S. Carroll, and Daniel C. Liebler, working at Vanderbilt Univ...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2014-07-10 | MSV000078777 | MassIVE
ProteomicsSite-specific mapping and quantification of protein S-sulphenylation in cells

Jing Yang, Vinayak Gupta, Kate S. Carroll, & Daniel C. Liebler, (2014) Nature Communications 5, 4776, doi:10.1038/ncomms5776

Cysteine S-sulphenylation provides redox regulation of protein f...

ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2019-08-28 | MSV000084244 | MassIVE
OtherSite-specific mapping and quantification of protein S-sulphenylation in cells.
Data from CPTAC Portal. Experiment: Protein S-sulfenylation SulfenQ mzML_data A431, file: SulfenQ_A431_EGF_LH_B3.mgf. Published as part of Nat Commun. 2014 Sep 1;5:4776 . From the Abstract: {{i}} Cysteine S-sulphenylation provides redox regulation of protein functions, but the global cellular impac...
ORGANISM(S): Homo_sapiens_viruses, Human_female 
GPM32320005182 | GPMDB
TranscriptomicsRif1 regulates initiation timing of late replication origins throughout the S. cerevisiae genome [ChIP-Seq]
Chromosomal DNA replication involves the coordinated activity of hundreds to thousands of replication origins. Individual replication origins are subject to epigenetic regulation of their activity during S-phase, resulting in differential efficiencies and timings of replication initiation during S-...
ORGANISM(S): Saccharomyces cerevisiae 
2014-06-01 | E-GEOD-55155 | biostudies-arrayexpress
TranscriptomicsS phase and HU profiles in wild-type and mutant cells
Total S phase was measured for wild-type cells undergoing meiS and mitS. Early replication origins were mapped in mitS in wild-type cells, and in meiS for wild-type, sml1 delete, rec8 delete and spo11 delete cells. Comparative genome hybridization was used to measure the kinetics and final extent of...
ORGANISM(S): Saccharomyces cerevisiae 
2012-06-18 | E-GEOD-35662 | biostudies-arrayexpress
ProteomicsProteome-wide characterization of human S-acylated proteins
Reversible protein S-acylation dynamically regulates the subcellular localization, activity, and stability of proteins, and plays a pivotal role in various diseases such as cancer and neurodegenerative disorders. Nevertheless, a system-wide analysis of S-acylation in human pathophysiology is still e...
ORGANISM(S): Homo sapiens (Human) 
2022-02-24 | PXD006001 | Pride
Motif Proteomics Palmitoylation S-acylation Human Proteome-wide Lc-ms/ms Site 
ProteomicsS-acylproteomic analysis of human prostate cancer LNCaP cells by LB-ABE
Deep S-acylproteomic analysis of LNCaP cells by coupling LB-ABE with label-free quantitative proteomics
ORGANISM(S): Homo sapiens (Human) 
2021-09-08 | PXD013187 | Pride
Palmitoylation  s-acylation  palmitoyl-proteomics  s-acylproteomics  lncap  lb-abe 
TranscriptomicsRif1 regulates initiation timing of late replication origins throughout the S. cerevisiae genome [array]
Chromosomal DNA replication involves the coordinated activity of hundreds to thousands of replication origins. Individual replication origins are subject to epigenetic regulation of their activity during S-phase, resulting in differential efficiencies and timings of replication initiation during S-...
ORGANISM(S): Saccharomyces cerevisiae 
2014-06-01 | E-GEOD-55130 | biostudies-arrayexpress
ProteomicsGlobal proteome-wide analysis of cysteine S-nitrosylation in Toxoplasma gondii
Toxoplasma gondii transmitted via various route and rapidly duplicated during the acute infection, which caused the important zoonosis regarding to medicine and veterinary, toxoplasmosis. T. gondii possessed innate capability of producing nitric oxide (NO) and nitric oxide derivatives and S-nitrosyl...
ORGANISM(S): Toxoplasma gondii 
2024-01-26 | PXD046083 | Pride
Toxoplasma gondii  post-translational modifications  cysteine s-nitrosylation  s-nitrosylated pro-teome 
TranscriptomicsTranscription profiling of S. pneumoniae D39, a serotype 2 strain of pneumococcus, with that of an isogenic deletion mutant, (delta)luxS, time series
We were interested in determining if the LuxS signaling system contributed to the regulation of pneumococcal genes. To accomplish this, we compared the in vitro transcriptional profiles over time of S. pneumoniae D39, a serotype 2 strain of pneumococcus, with that of an isogenic deletion mutant, (d...
ORGANISM(S): Streptococcus pneumoniae 
2005-07-21 | E-SMDB-2173 | biostudies-arrayexpress
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