Zhang Mi-Mi MM - OmicsDI

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Unknown (469)
Proteomics (51)
Metabolomics (23)
Transcriptomics (15)
Genomics (1)

Organisms

Homo sapiens (24)
Mus musculus (22)
Rattus norvegicus (5)
Beauveria bassiana CGMCC 7.34 (4)
Zea mays (2)
Arabidopsis thaliana (2)
Streptococcus suis (1)
Danio rerio (1)
Capra hircus (1)
Erysipelotrichaceae bacterium (1)
Marseillevirus (1)
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Salmonella enterica subsp. enterica serovar Untypable str. 83332 (1)
Streptomyces coelicolor (1)
Sus scrofa domesticus (1)

Repository

pride (51)
MetaboLights (23)
biostudies-arrayexpress (16)

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Cell culture (8)
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Disease

Cardiovascular system disease (3)
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CADASIL (1)
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Disease free (1)
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Myocardial ischemia (1)
Pancreatic ductal carcinoma (1)
Type 1 diabetes mellitus (1)

Technology Type

Mass Spectrometry (51)
Shotgun proteomics (25)
Mass spectrometry (21)
Bottom-up proteomics (14)
Affinity purification coupled with mass spectrometry proteomics (5)
Gel-based experiment (4)
Data-independent acquisition (3)
SWATH MS (3)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Data-dependent acquisition (2)
MSE (2)
Mass spectrometry assay (1)
NMR spectroscopy (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (12)
Liquid Chromatography MS - positive - reverse phase (12)
Illumina NovaSeq 6000 (2)
Liquid Chromatography MS - negative - hilic (2)
Liquid Chromatography MS - positive - hilic (2)
Tandem Gas Chromatography MS - positive (2)
Bruker (1)
Gas Chromatography MS - (1)
Gas Chromatography MS - positive - medium polarity - Agilent 6890 GC - LECO Pegasus III TOF MS (LECO) (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - alternating – hilic (1)
Liquid Chromatography MS - negative (1)
Tandem Gas Chromatography MS - (1)

Publication Date

2023 (13)
2024 (12)
2022 (11)
2025 (9)
2021 (8)
2026 (8)
2012 (5)
2018 (5)
2010 (4)
2020 (4)
2017 (3)
2015 (2)
2013 (2)
2016 (1)
2008 (1)
2007 (1)
2019 (1)

CHEBI ID

CHEBI:16027 (10)
CHEBI:16704 (9)
CHEBI:16708 (9)
CHEBI:17368 (9)
CHEBI:17568 (9)
CHEBI:30769 (9)
CHEBI:15756 (8)
CHEBI:16040 (8)
CHEBI:17553 (8)
CHEBI:17596 (8)
CHEBI:17895 (8)
CHEBI:30887 (8)
CHEBI:15741 (7)
CHEBI:15891 (7)
CHEBI:15971 (7)
CHEBI:16235 (7)
CHEBI:16335 (7)
CHEBI:16680 (7)
CHEBI:16750 (7)
CHEBI:16919 (7)
CHEBI:17115 (7)
CHEBI:17202 (7)
CHEBI:17268 (7)
CHEBI:17361 (7)
CHEBI:17562 (7)
CHEBI:18050 (7)
CHEBI:28842 (7)
CHEBI:15318 (6)
CHEBI:15603 (6)
CHEBI:16347 (6)

Metabolite Name

Cytosine (9)
L-Histidine (9)
L-Phenylalanine (9)
Creatine (8)
Guanine (8)
L-Arginine (8)
Uracil (8)
Adenosine (7)
Creatinine (7)
Guanosine (7)
Hypoxanthine (7)
Indole (7)
L-Cystine (7)
L-Leucine (7)
L-Methionine (7)
L-Tyrosine (7)
Thiamine (7)
Thymine (7)
Adenine (6)
Inosine (6)
L-Asparagine (6)
L-Carnitine (6)
L-Glutamine (6)
L-Lysine (6)
L-Serine (6)
L-Valine (6)
Riboflavin (6)
Spermidine (6)
Taurine (6)
1-Methylhistidine (5)

Modification

Not available (1)

Study type

Transcription profiling by array (9)
RNA-seq of coding RNA (4)
Comparative genomic hybridization by array (1)
ChIP-seq (1)
RNA-seq of non coding RNA (1)

Release Date

2022 (62)
2021 (54)
2020 (52)
2025 (49)
2023 (47)
2024 (41)
2017 (32)
2018 (28)
2019 (25)
2015 (18)
2013 (13)
2016 (12)
2012 (11)
2014 (8)
2011 (8)
2010 (7)
2026 (7)
2009 (5)
2008 (3)
2007 (2)
2006 (1)

Lab affiliation

Biotechnology Research Center, No.2 Tiansheng Road, BeiBei District, Chongqing, 400715,P.R.China (4)
Department of Molecular & Integrative Physiology,University of Michigan Medical School, 5325 Brehm Tower, 1000 Wall St., Ann Arbor, MI, 48105 (2)
School of Life Sciences, Tsinghua University, China (2)
Cedars-Sinai Medical Center (1)
Centre for medicines discovery, University of Oxford (1)
Children's Hospital of Nanjing Medical University (1)
Crop Genetics John Innes Centre Norfolk United Kingdom (1)
Department of Analytical Chemistry and CAS Key Laboratory of Receptor Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, 201203, China (1)
Department of Biochemistry and Molecular Pharmacology, NYU Grossman School of Medicine, New York, US (1)
Department of Cardiology and Institute of Vascular Medicine, Peking University Third Hospital; NHC Key Laboratory of Cardiovascular Molecular Biology and Regulatory Peptides; Key Laboratory of Molecular Cardiovascular Science, Ministry of Education; Beijing Key Laboratory of Cardiovascular Receptors Research; Haihe Laboratory of Cell Ecosystem. Beijing 100191, China. (1)
Department of Cell and Developmental Biology, Neuroscience Graduate Program, Department of Neurology University of Michigan Medical School, Ann Arbor, MI 48109-2200 (1)
Department of Microbiology and Immunology, University of Michigan, Ann Arbor, MI USA. (1)
Department of Molecular & Integrative Physiology, Department of Internal Medicine, Division of Gastroenterology and Hepatology, University of Michigan, Ann Arbor, MI 48109, USA (1)
Department of Neurology, Fujian Medical University Union Hospital (1)
Department of Pediatrics, Shengjing Hospital of China Medical University (1)
Department of Pharmaceutical Sciences, Eugene Applebaum College of Pharmacy and Health Sciences, Wayne State University, 259 Mack Avenue, Detroit, MI 48201, USA (1)
Department of Pharmacology, University of Michigan, Ann Arbor, MI 48109 (1)
Department of Pharmacy at the Second Affiliated Hospital, Harbin Medical University, Harbin, China. (1)
Department of Physiology and Biophysics University of Mississippi Medical Center (1)
Department of Physiology, School of Medicine, Wayne State University (1)
Department of Science, University of Chieti, Italy (1)
Department of Surgery, University of Michigan Medical School, Ann Arbor, MI, USA (1)
Departments of Neurology, University of Michigan, Ann Arbor, MI 48109-5622, USA. Molecular & Integrative Physiology, University of Michigan, Ann Arbor, MI 48109-5622, USA Neurology Service, VA Ann Arbor Healthcare System, Ann Arbor, MI 48105, USA (1)
Eye Research Center, Oakland University William Beaumont School of Medicine, Rochester, MI, US (1)
Henan Agricultural University (1)
Human Phenome Institute,Zhangjiang FudanInternational Innovation Center, Fudan UniversityShanghai, 201203, China. (1)
Hunan Institute of Animal and Veterinary Science (1)
KU Leuven - Translational Cardiomyology Laboratory, Stem Cell and Developmental Biology, Department of Development and Regeneration (1)
Key Laboratory of Acupuncture and Medicine Research of Ministry of Education, Nanjing University of Chinese Medicine (1)
Lab head of the Systems Oncology group at CRUK MI. (1)

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MMP-9 dependent extracellular protein changes in the left ventriclar infarcts at day 7 post myocardial infarction

Glycopeptides of the LVI tissues of WT and MMP-9 null mice at day-7 post-MI.

ORGANISM(S): Mus musculus (Mouse)

2018-03-06 | PXD001393 | Pride

Mmp-9 Lv Glycopeptides Myocardial infarction

CRL2ZER1/ZYG11B recognizes small N-terminal residues for degradation

N-degron pathway plays an important role in the protein quality control and maintenance of cellular protein homeostasis. ZER1 and ZYG11B, the substrate receptors of the Cullin 2-RING E3 ubiquitin ligase (CRL2), recognize N-terminal (Nt) glycine degrons and participate in the Nt-myristoylation qualit...

ORGANISM(S): Homo sapiens (Human)

2023-03-11 | PXD037312 | Pride

N-terminal acetylation Nt-ser Crl2zer1/zyg11b

Comparison of Oblique Lateral Interbody Fusion (OLIF) and Minimally Invasive Transforaminal Lumbar Interbody Fusion (MI-TLIF) for Treatment of Lumbar Degeneration Disease: A Prospective Cohort Study.

Not available

S-EPMC8865215 | biostudies-literature

CD36 palmitoylation regulates the lipid metabolic homeostasis

Alterations in myocardial energy substrate metabolism following myocardial infarction (MI) results in structural and functional abnormalities of the heart. The fatty acid translocase CD36 (CD36), acrucial membrane protein, plays a pivotal role in regulating fatty acid (FA) uptake and lipid homeos...

2025-06-15 | MTBLS12600 | MetaboLights

Mouse Kidney TMT Quantitative Proteomics

We extracted proximal renal tubules of WT and Lonp1-cKO mice (n=3), and then performed isobaric tags for relative and absolute quantification (iTRAQ)-based quantitative proteomic analysis to assess differential protein-expression levels.

ORGANISM(S): Mus musculus (Mouse)

2022-12-09 | PXD037552 | Pride

Lc-ms/ms Mouse Kidney

Rats, heart tissue, iTRAQ proteomics

Male Sprague-Dawley rats were randomly divided into (1) mock surgery (MS) group, mock surgery after EP (EPMS) group, myocardial ischemia (MI) group and MI after EP (EPMI) group. Twenty-four hours after MI or mock surgery , left ventricular tissues below the ligation were collected for the iTRAQ prot...

ORGANISM(S): Rattus norvegicus (Rat)

2020-04-23 | PXD017765 | Pride

Itraq proteomics Rats Heart tissue

LC-MS/MS of dithiothreitol-extracted proteins from the insect fungal pathogen Beauveria bassiana conidia

Proteins were extracted using 2 mM DTT from Beauveria bassiana conidia were identified and quantified using Label-free quantitative mass spectrometry.

ORGANISM(S): Beauveria bassiana CGMCC 7.34

2022-03-02 | PXD004474 | Pride

Llc-ms/ms dtt-extracted proteins beauveria bassiana conidia

LC-MS/MS of dithiothreitol-extracted proteins from the insect fungal pathogen Beauveria bassiana blastospores

Proteins were extracted using 2 mM DTT from Beauveria bassiana blastospores were identified and quantified using Label-free quantitative mass spectrometry.

ORGANISM(S): Beauveria bassiana CGMCC 7.34

2017-01-04 | PXD004535 | Pride

Llc-ms/ms dtt-extracted proteins beauveria bassiana blastospores

LC-MS/MS of dithiothreitol-extracted proteins from the insect fungal pathogen Beauveria bassiana conidia

Proteins were extracted using 2 mM DTT from Beauveria bassiana conidia were identified and quantified using Label-free quantitative mass spectrometry.

ORGANISM(S): Beauveria bassiana CGMCC 7.34

2017-01-04 | PXD004470 | Pride

Llc-ms/ms dtt-extracted proteins beauveria bassiana conidia

Quantitative proteomics uncovers the regulation of energy metabolism by Shexiang Baoxin Pill in myocardial infarction model rats

Ethnopharmacological relevance: Shexiang Baoxin Pill (SBP) is a traditional formulation of a Chinese patent medicine, which has been commonly used for the treatment of cardiovascular disease (CVD) in China since the 1980s. Previous clinical studies have shown that SBP is safe and effective in patien...

ORGANISM(S): Rattus norvegicus (Rat)

2020-12-14 | PXD019296 | Pride

Shexiang baoxin pill cardiovascular disease lc-ms/ms quantitative proteomics energy metabolism

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559 Results

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