Zhang Wenqing W

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Proteomics (8)
Unknown (1)
Metabolomics (1)

Organisms

Homo sapiens (4)
Mus musculus (3)
Alphavirus (2)
Anemia (2)
Betaherpesvirinae (2)
Brassica oleracea var. oleracea (2)
Cowpox virus (2)
Coxsackievirus (2)
Cytomegalovirus (2)
Dengue virus (2)
EFO:0001352 (2)
Filoviridae (2)
Hepatitis B virus (2)
Human alphaherpesvirus 1 (2)
Human betaherpesvirus 5 (2)
Human immunodeficiency virus (2)
Human immunodeficiency virus 1 (2)
Human immunodeficiency virus 2 (2)
Influenza A virus (2)
Influenza C virus (2)
Japanese encephalitis virus group (2)
Lyssavirus rabies (2)
Middle East respiratory syndrome-related coronavirus (2)
Monkeypox virus (2)
Orthopoxvirus (2)
Orthopoxvirus vaccinia (2)
Rattus (2)
Staphylococcus aureus (2)
Streptococcus pneumoniae (2)
Saccharomyces cerevisiae S288C (1)

Repository

iProX (6)
pride (2)
MetaboLights (1)

Tissue

Cell culture (1)
Hair (1)

Technology Type

Mass Spectrometry (2)
Shotgun proteomics (2)
Mass spectrometry (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2022 (2)
2018 (2)
2023 (1)
2021 (1)
2019 (1)

CHEBI ID

CHEBI:189528 (1)
CHEBI:189527 (1)
CHEBI:189523 (1)
CHEBI:189519 (1)
CHEBI:189515 (1)
CHEBI:189513 (1)
CHEBI:189507 (1)
CHEBI:189506 (1)
CHEBI:189505 (1)
CHEBI:189504 (1)
CHEBI:189503 (1)
CHEBI:189502 (1)
CHEBI:189500 (1)
CHEBI:174548 (1)
CHEBI:189499 (1)
CHEBI:189497 (1)
CHEBI:189494 (1)
CHEBI:189493 (1)
CHEBI:189492 (1)
CHEBI:189491 (1)
CHEBI:189490 (1)
CHEBI:90748 (1)
CHEBI:189488 (1)
CHEBI:189484 (1)
CHEBI:189483 (1)
CHEBI:189482 (1)
CHEBI:189481 (1)
CHEBI:189480 (1)
CHEBI:189479 (1)
CHEBI:189478 (1)

Metabolite Name

1-({(1s,4s,6s)-6-isopropyl-3-methyl-4-[2-(4-methyl-1-piperazinyl)-2-oxoethyl]-2-cyclohexen-1-yl}methyl)-3-(3-methoxyphenyl)urea (1)
N-({(2r,4s,5r)-5-[3-(3,4-dimethoxyphenyl)-1-methyl-1h-pyrazol-5-yl]-1-azabicyclo[2.2.2]oct-2-yl}methyl)-2-ethylbutanamide (1)
Diffractic acid (1)
6-o-[(2e)-3-(4-hydroxyphenyl)-2-propenoyl]-1-o-[(2e)-3-phenyl-2-propenoyl]-beta-d-glucopyranose (1)
4-methoxybenzaldehyde n-[6-(tert-butyl)thieno[3,2-d]pyrimidin-4-yl]hydrazone (1)
4-(4-chlorophenyl)-n-(2-pyridinylmethyl)cyclohexanecarboxamide (1)
4h-1-benzopyran-4-one, 6-beta-d-glucopyranosyl-2,3-dihydro-5,7-dihydroxy-2-(4-hydroxyphenyl)-, (s)- (Hemiphloin) (1)
(3r,4s)-4,6,8-trihydroxy-7-methoxy-3-methyl-3,4-dihydro-1h-isochromen-1-one (1)
1,4:3,6-dianhydro-2,5-dideoxy-2-{[4-(3-fluorophenyl)-2-pyrimidinyl]amino}-5-[(methoxyacetyl)amino]-l-iditol (1)
Cetirizine n-oxide (1)
Adb-pinaca pentanoic acid metabolite (1)
5,8-dihydroxy-4-oxo-1,2,3,4-tetrahydro-1-naphthalenyl 6-o-(3,4,5-trihydroxybenzoyl)-beta-d-glucopyranoside (1)
Methyl (1s,4ar,6s,7r,7as)-1-(beta-d-glucopyranosyloxy)-4a,7-dihydroxy-6-{[(2e)-3-(4-hydroxyphenyl)-2-propenoyl]oxy}-7-methyl-1,4a,5,6,7,7a-hexahydrocyclopenta[c]pyran-4-carboxylate (1)
Methyl 4-{2-cyano-2-[(4-methylphenyl)sulfonyl]vinyl}-2,5-dimethyl-1h-pyrrole-3-carboxylate (1)
N-[(6as,8s)-2-(2,3-dimethylphenyl)-6,12-dioxo-5,6,6a,7,8,9,10,12-octahydropyrido[2,1-c][1,4]benzodiazepin-8-yl]nicotinamide (1)
4-[4-(4-hydroxy-3-methoxyphenyl)tetrahydro-1h,3h-furo[3,4-c]furan-1-yl]-2-methoxyphenyl hexopyranoside (1)
4-[(1s,3as,4r,6ar)-3a-hydroxy-4-(4-hydroxy-3-methoxyphenyl)tetrahydro-1h,3h-furo[3,4-c]furan-1-yl]-2-methoxyphenyl beta-d-glucopyranoside (1)
N4-acetyl sulfamethazine (1)
2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-4-oxo-4h-chromen-3-yl 6-o-(6-deoxyhexopyranosyl)-4-o-[(2e)-3-(4-hydroxyphenyl)-2-propenoyl]hexopyranoside (1)
Fr 145237 (1)
Ethyl {(1s,4s,5s)-4-[(isonicotinoylamino)methyl]-5-isopropyl-2-methyl-2-cyclohexen-1-yl}acetate (1)
2-hydroxy-4-(4-hydroxyphenyl)butanoic acid (1)
2-(tert-butylsulfonyl)-3-(3-methylbenzo[b]thiophen-2-yl)acrylonitrile (1)
2-hydroxy-4-methoxy-3-(3-methyl-2-buten-1-yl)-6-[(e)-2-phenylvinyl]benzoic acid (1)
N-(2-fluorophenyl)-2-methyl-6-(trifluoromethyl)nicotinamide (1)
Metazachlor-esa (1)
Aica ribonucleotide (1)
2-[(3s)-1-(cyclohexylmethyl)-3-pyrrolidinyl]-5-fluoro-1h-benzimidazole (1)
N-(4-{(2r,3r)-3-(hydroxymethyl)-4-[(1-methyl-1h-imidazol-2-yl)methyl]-5-oxo-2-morpholinyl}phenyl)-2-methylpropanamide (1)
3-hydroxy-3,5,5-trimethyl-4-(3-oxo-1-buten-1-ylidene)cyclohexyl Beta-d-glucopyranoside (1)

Release Date

2025 (1)

Lab affiliation

Key Laboratory of Systems Microbial Biotechnology, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences (1)
Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences (1)

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Combining Untargeted and Targeted Proteomic Strategies for Discrimination and Quantification of Cashmere Fibers

Cashmere is regarded as a specialty and luxury ﬁber due to its scarcity and high economic value. For fiber quality assessment, it is technically very challenging to distinguish and quantify the cashmere fiber from yak or wool fibers because of their highly similar physical appearance and substantial...

ORGANISM(S): Bos mutus grunniens (Wild yak) (Bos grunniens) Ovis aries Capra hircus (Goat)

2018-10-25 | PXD003107 | Pride

Proteome-wide identification of SAPs in an industrial yeast strain

Most proteogenomic approaches for mapping single amino acid polymorphisms (SAPs) require construction of a sample-specific database containing protein variants predicted from the next-generation sequencing (NGS) data. We present a new strategy for direct SAP detection without relying on NGS data. Am...

ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast)

2018-04-18 | PXD003101 | Pride

Industrial yeast strain Proteogenomics Sap

Benchmarking commonly used software suites and analysis workflows for DIA proteomics and phosphoproteomics

This repository is related to the work "Benchmarking commonly usedsoftware suites and analysis workflows for DIA proteomics and phosphoproteomics". The following files are stored here: 1. four MS datasets generated in this work, including two two-species benchmark datasets acquired on QE HF and tims...

ORGANISM(S): Homo Sapiens Saccharomyces Cerevisiae S288c Mus Musculus

2022-12-08 | PXD034709 |

Structural mass spectrometry captures residue-resolved comprehensive conformational rearrangements of a G protein-coupled receptor

GPCR structural studies with in-solution spectroscopic approaches have offered distinctive insights into GPCR activation and signaling that highly complement those yielded from structural snapshots by crystallography or cryo-EM. While most current spectroscopic approaches excel at probing structural...

ORGANISM(S): Homo Sapiens

PXD048942 |

Mouse brain tissue proteomics-Shui group

DIA and PRM raw data of mouse brain tissues. R1: Cerebellum, R2: Midbrain, R3: Spinal cord

ORGANISM(S): Mus Musculus

2019-11-26 | PXD016441 |

6-aminonicotinamide, a G6PD inhibitor, mitigates CAPS1 reduction mediated HCC metastasis via ERK and GSK3β signals.

Not available

S-EPMC12547465 | biostudies-literature

Multi-Omics of Spinal Ependymal Tumor

We conducted a multi-omics analysis of 25 patients, comprising 8 with ependymoma, 10 with myxopapillary ependymoma, and 7 with subependymoma, to identify both shared and distinct genomic, transcriptional, and proteomic features among these subtypes.

ORGANISM(S): Homo Sapiens

PXD056112 |

Conformational dynamics of the activated GLP-1 receptor-Gs complex revealed by cross-linking mass spectrometry and integrative modeling

Despite revolutionary advancements in GPCR structural biology, our understanding of the complexity of GPCR activation and signaling would not be complete without complementary information on the conformational dynamics. Yet it is particularly challenging to study the dynamics of GPCR complexes with ...

ORGANISM(S): Homo Sapiens

2023-01-08 | PXD039315 |

Multiregional profiling of the brain transmembrane proteome uncovers novel regulators of depression

Our study provides an enabling technology and rich data resources to expand the understanding of transmembrane proteome organization and dynamics in the brain as well as accelerate the discovery of potential therapeutic targets for depression treatment.

ORGANISM(S): Mus Musculus

2021-07-26 | PXD027559 |

Plant elicitor peptide signalling confers rice resistance to piercing-sucking insect herbivores and pathogens

Rice is a staple food crop worldwide, and its production is severely threatened by phloem-feeding insect herbivores, particularly the brown planthopper (BPH, Nilaparvata lugens), and destructive pathogens. Despite the identification of many BPH resistance genes, the molecular basis of rice resistanc...

2022-02-23 | MTBLS3518 | MetaboLights

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