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ProteomicsAlginate metabolic pathways of the strain C42 associated with Sargassum
Based on the genome sequencing and gene annotation, we analyzed the alginate lyases and other genes related to alginate metabolism of strain Vibrio sp. C42, with the highest alginate-degrading activity. Combined with proteome measurement, we proposed its alginate metabolic pathways.
ORGANISM(S): Vibrio atlanticus 
2026-06-04 | PXD037554 | Pride
Alginate Sargassum Alginate lyase Alginate metabolic pathway Vibrio 
ProteomicsCultivable Alginate Lyase-Excreting Bacteria Associated with Sargassum and their alginate metabolic pathways
Based on the genome sequencing and gene annotation, we analyzed the alginate lyases and other genes related to alginate metabolism of strain Vibrio sp. C42, with the highest alginate-degrading activity. Combined with secretome measurement, we proposed its alginate metabolic pathways.
ORGANISM(S): Vibrio atlanticus 
2026-06-04 | PXD029037 | Pride
Alginolytic bacteria Epiphyte Metabolic pathway Sargassum Alginate 
ProteomicsBmori - Cocoon, SC (Zhangetal.,plosone2015)
abundance based on Spectral counting, Interaction consistency score: 1.0, Coverage: 2
ORGANISM(S): 7091 
2015-00-00 | 1004366984 | PAXDB
GenomicsA Werner syndrome stem cell model unveils heterochromatin alterations as a driver of human aging
Our data throw light upon the effect of WRN deficiency on gene expression and epigenomic modification, which indicates aging-associated changes from both genomic and epigenomic level. It was compared between WRN+/+ and WRN-/- in hESCs and hMSCs that the gene expression landscapes and epigenetic modi...
ORGANISM(S): Homo sapiens 
2015-05-13 | E-GEOD-52285 | biostudies-arrayexpress
ProteomicsProteomic profiling and molecular reclassification of high-grade serous ovarian cancer
In this study, we performed a comprehensive proteomic analysis of 116 primary tumor tissues from HGSOC patients. Our findings offer valuable insights into HGSOC’s molecular landscape, which could inform future biological studies, drug discovery, and the development of targeted therapies.
ORGANISM(S): Homo Sapiens 
2026-02-12 | PXD074808 |
ProteomicsKDM6A downregulation promotes tumor-prone cytokines expression in cancer-associated fibroblasts by activating enhancers
co-IP assays demonstrate that KDM6A is bound to WDR5, facilitating its association with the COMPASS complex and the polycomb repressive complex at the expected target loci.
ORGANISM(S): Homo Sapiens 
2024-12-04 | PXD058594 |
ProteomicsQuantitative proteomics reveals the antibiotics adaptive mechanism of Aeromonas hydrophila in kanamycin stress
Aeromonas hydrophila is a widespread opportunistic pathogen of aquatic fishes in freshwater habitats. The current emergence of antimicrobial-resistant A. hydrophila has been reported in the world while the bacterial antibiotics adaptive mechanism is still largely known. In this study, using quantita...
ORGANISM(S): Aeromonas Hydrophila Subsp. Hydrophila Al09-71 
PXD031300 |
ProteomicsCross-Linking Mass Spectrometry (CXMS) of human pre-60S ribosomal particles
Cross-Linking Mass Spectrometry (CXMS) analysis of human pre-60S ribosomal particles.
ORGANISM(S): Homo Sapiens 
PXD019025 |
ProteomicsIdentification of ubiquitination sites on the GSTM2 protein
The human GSTM2 protein was enriched, followed by mass spectrometry to identify its ubiquitination sites.
ORGANISM(S): Homo Sapiens 
2025-12-15 | PXD071988 |
ProteomicsSerum antigenome profiling reveals diagnostic models for rheumatoid arthritis
This study presented serum antigen profiling of RA. Among them, three panels of antigens were identified to classify RA, ACPA-positive and ACPA-negative RA patients as diagnostic biomarkers.
ORGANISM(S): Homo Sapiens 
2022-02-08 | PXD031498 |
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