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TranscriptomicsRNA-Seq analysis of wild-type and Brpf1-null fetal liver LSK cells
To compare the impact of hematopoietic-specific Brpf1 gene inactivation, LSK (Lin-Sca1+cKit1+) cells were sorted from wild-type and Brpf1-null fetal liver cells for RNA-Seq. Four E14.5 embryos were used to pool sufficient LSK cells for total RNA isolation and subsequent sequencing on HiSq2500. Two i...
ORGANISM(S): Mus musculus 
2016-08-10 | E-GEOD-83483 | biostudies-arrayexpress
GenomicsGenome-wide Analysis Reveals Conserved and Divergent Features of Notch1/RBPJ Binding in Human and Murine T Lymphoblastic Leukemia Cells
Notch1 regulates gene expression by associating with the DNA-binding factor RBPJ and is oncogenic in murine and human T cell progenitors. Using ChIP-Seq, we find that in human and murine T-LL genomes Notch1 binds preferentially to promoters, to RBPJ binding sites, and near imputed ZNF143, Ets and Ru...
ORGANISM(S): Mus musculus 
2011-07-06 | E-GEOD-29600 | biostudies-arrayexpress
UnknownThe complete mitochondrial genome of Coccotorusbeijingensis Lin et Li, 1990 (Coleoptera, Curculionidae, Curculioninae, Anthonomini) and its phylogenetic implications.
Not available
S-EPMC9836419 | biostudies-literature
ProteomicsDynamics of the interaction between cotton bollworm Helicoverpa armigera and nucleopolyhedrovirus as revealed by integrated transcriptomic and proteomic analyses
Over the past decades, Helicoverpa armigera nucleopolyhedrovirus (HearNPV) has been widely used for biocontrol of cotton bollworm, which is one of the most destructive pest insects in agriculture worldwide. However, the molecular mechanism underlying the interaction between HearNPV and host insects ...
ORGANISM(S): Helicoverpa armigera (Cotton bollworm) 
2017-04-19 | PXD004748 | Pride
Cotton bollworm Insect immunity Carbohydrate metabolism Baculovirus Host-pathogen interaction Fat body Rna-seq Lc-ms/ms 
TranscriptomicsMyeloid derived suppressor cells enhance stemness of cancer cells by inducing miRNA101 and suppressing the corepressor CtBP2
The work identifies an immune associated cellular, molecular and clinical network involving MDSCs-microRNA101-CtBP2-stem cell core genes, which extrinsically controls cancer stemness and impacts patient outcome. Primary ovarian cancer cells (5 x105) were co-cultured with freshly sorted ovarian cance...
ORGANISM(S): Homo sapiens 
2013-08-23 | E-GEOD-50082 | biostudies-arrayexpress
ProteomicsMS analysis of anti-Senp7 pulldown in adipocytes
To identify the function of Senp7 in adipocytes, we conducted a pulldown aasay and mass spectrometry analysis to identify proteins that interacted with Senp7.
ORGANISM(S): Mus musculus (Mouse) 
2024-06-16 | PXD043479 | Pride
Senp7 Adipocyte 
ProteomicsMass spectrometry analysis of proteins interacting with STC1
identify the potential partners of STC1 at the protein level, we performed mass spectrometry on B16-F10 tumor cells stably expressing FLAG-tagged STC1.
ORGANISM(S): Mus musculus (Mouse) 
2020-12-23 | PXD023251 | Pride
Ms Ip Stc1 B16-f10 tumor cells 
UnknownEffects of nitrogen input on soil bacterial community structure and soil nitrogen cycling in the rhizosphere soil of Lycium barbarum L.
Not available
S-EPMC9871820 | biostudies-literature
UnknownTranscriptome Analysis Reveals the Flexibility of Cordycepin Network in Cordyceps militaris Activated by L-Alanine Addition.
Not available
S-EPMC7193312 | biostudies-literature
UnknownInduction of tetraploids in Paper Mulberry (Broussonetia papyrifera (L.) L'Her. ex Vent.) by colchicine.
Not available
S-EPMC10655367 | biostudies-literature
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