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TranscriptomicsRNA-Seq profiling of single bovine oocyte transcript abundance and its modulation by cytoplasmic polyadenylation
Polyadenylated RNA from individual germinal vesicle and metaphase II ooyctes was amplified and processed for Illumina sequencing. Increases in polyadenylated transcript abundance were observed and are likely due to cytoplasmic polyadenylation. Transcriptomic analysis of GV and MII bovine oocytes.
ORGANISM(S): Bos taurus 
2015-07-08 | E-GEOD-61717 | biostudies-arrayexpress
GenomicsUbiquitin-Proteasome System Dysregulation in Alzheimer's Disease Impacts Protein Abundance
Ubiquitin-Proteasome System Dysregulation in Alzheimer's Disease Impacts Protein Abundance
PRJNA1449257 | ENA
ProteomicsLow-Abundance Serum Protein Biomarker Candidates for HCC in Patients with Liver Cirrhosis
In this study, we employed both untargeted and targeted analysis of low abundance serum proteins to identify potential biomarkers for HCC. We employed a two-phase proteomics approach to identify low abundance serum proteins as potential biomarkers for HCC.The first phase involved DDA-based untargete...
ORGANISM(S): Homo sapiens (Human) 
2026-06-15 | PXD061721 | Pride
Nano-lc-ms/ms Low abundance protein Serum Liliver cancer Biomarker 
ProteomicsAn integrated analysis of protein abundance, transcript level and tissue diversity to reveal developmental regulation of maize
The differentiation and subsequent development of plant tissues or organs are tightly regulated at multiple levels, including the transcriptional, posttranscriptional, translational, and posttranslational levels. Transcriptomes define many of the tissue-specific gene expression patterns in maize, an...
ORGANISM(S): Zea mays (Maize) 
2018-01-02 | PXD008464 | Pride
Tissue-specific proteins Proteome Swath-ms Differentially expressed proteins Transcriptome Zea mays l. 
TranscriptomicsProfiling the transcriptional response upon deletion of PUN1
Yeast filamentous growth is a stress response to conditions of nitrogen deprivation, wherein yeast colonies form pseudohyphal filaments of elongated and connected cells. As proteins mediating adhesion and transport are required for this growth transition, the protein complement at the yeast cell pe...
ORGANISM(S): Saccharomyces cerevisiae 
2010-02-17 | E-GEOD-20351 | biostudies-arrayexpress
ProteomicsCharacterization of differentially abundant proteins among Leishmania (Viannia) braziliensis strains isolated from atypical or typical lesions
Leishmania (Viannia) braziliensis is the main etiological agent of cutaneous and mucocutaneous leishmaniasis in Latin America. Reports have described non-ulcerated atypical tegumentary leishmaniasis cases caused by L. braziliensis in several regions of the world, including in patients from the Xacri...
ORGANISM(S): Leishmania braziliensis 
2022-02-11 | PXD029995 | Pride
Leishmania braziliensis Abundance Atypical Tmt. Label based Proteome 
TranscriptomicsAbsolute quantification of protein production reveals principles underlying protein synthesis rates
A quantitative view of cellular functions requires precise measures of the rates of biomolecule production, especially proteins-the direct effectors of biological processes. Here we present a genome-wide approach, based on ribosome profiling, for measuring absolute protein synthesis rates. The resul...
ORGANISM(S): Escherichia coli 
2014-04-24 | E-GEOD-53767 | biostudies-arrayexpress
UnknownCharacterization of human tear proteome reveals differentially abundance proteins in thyroid-associated ophthalmopathy.
Not available
S-EPMC9285480 | biostudies-literature
TranscriptomicsProteogenomic analysis of psoriasis reveals discordant and concordant changes in mRNA and protein abundance
Background: Psoriasis is a chronic disease characterized by the development of scaly red skin lesions and possible co-morbid conditions. The psoriasis lesional skin transcriptome has been extensively investigated, but mRNA levels do not necessarily reflect protein abundance. Methods: Lesional (PP) ...
ORGANISM(S): Homo sapiens 
2015-08-23 | E-GEOD-67785 | biostudies-arrayexpress
ProteomicsThe low abundance plasma proteome reveals changes associ-ated with breast implant capsular contracture
Capsular contracture (CC) is one of the most common post-operative complication associated with breast-implant associated infections. The mechanisms that lead to CC remain poorly understood. Plasma is an ideal biospecimen for early proteomics biomarker discovery. However, as higher-abundant proteins...
ORGANISM(S): Homo sapiens (Human) 
2024-10-17 | PXD044649 | Pride
Proteomics Tmt Breast implants Capsular contracture Human plasma 
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