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UnknownSynthetic plasma pool cohort correction for affinity-based proteomics datasets allows multiple study comparison.
Not available
S-EPMC11653412 | biostudies-literature
UnknownIdentification of Highly Sensitive Pleural Effusion Protein Biomarkers for Malignant Pleural Mesothelioma by Affinity-Based Quantitative Proteomics.
Not available
S-EPMC9913626 | biostudies-literature
UnknownMS-Based Proteomics of Body Fluids: The End of the Beginning.
Not available
S-EPMC10388585 | biostudies-literature
ProteomicsHuman Plasma Discovery Proteomics
This study addresses this gap by conducting a direct comparison of eight platforms, representing both affinity-based and diverse mass spectrometry approaches, and covering over 13,000 proteins. By applying these platforms to the same cohort, we systematically assess their performance, identifying ke...
ORGANISM(S): Homo sapiens (Human) 
2025-11-06 | PAD000022 | Pride
Human Affinity-based Plasma Proteomics 
UnknownNanoparticle enrichment mass-spectrometry proteomics identifies protein-altering variants for precise pQTL mapping.
Not available
S-EPMC10837160 | biostudies-literature
UnknownAn Inducible Retroviral Expression System for Tandem Affinity Purification Mass-Spectrometry-Based Proteomics Identifies Mixed Lineage Kinase Domain-like Protein (MLKL) as an Heat Shock Protein 90 (HSP90) Client.
Not available
S-EPMC4813694 | biostudies-literature
UnknownA genome-wide association study of mass spectrometry proteomics using the Seer Proteograph platform.
Not available
S-EPMC11160678 | biostudies-literature
ProteomicsShotgun analysis of proteins in HeLa cells following treatment with polyamine affinity-based probes
HeLa cells were incubated with affinity-based probes, synthetic analogs of endogenous metabolites: putrescine, spermidine, and spermine. Cells were photoirradiated briefly and proteins were extracted, digested with trypsin, and the resulting peptides were labeled with TMT. Proteins were quantified a...
ORGANISM(S): Homo sapiens (Human) 
2025-09-22 | PXD062452 | Pride
Hela Total protein levels Polyamines Affinity-based probes 
ProteomicsIn-vivo crosslinking based affinity purification-mass spectrometry for targeting intracellular protein-protein interactions
Comprehensive interactome analysis of targeted proteins is of great significance to understand how pro-teins work together for functional regulation. Until now, affinity purification strategy with mass spec-trometry (AP-MS) has been recognized as the most widely used technique for studying protein-p...
ORGANISM(S): Homo Sapiens 
2022-12-01 | PXD038473 |
ProteomicsHeLa cell protein interactome of polyamine affinity-based probes.
HeLa cells were incubated with affinity-based probes designed as synthetic analogs of endogenous metabolites: putrescine, spermidine, and spermine, while a monoamine compound served as a control. Probe-protein interactions were captured in situ using UV-induced crosslinking. After cell lysis, biorth...
ORGANISM(S): Homo sapiens (Human) 
2025-09-22 | PXD058706 | Pride
Hela Affinity-based probes Polyamines Putrescine Spermidine Protein-metabolite interactions Spermine 
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