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UnknownThe L-proline modified Zr-based MOF (Basu-proline) catalyst for the one-pot synthesis of dihydropyrano[3,2-c]chromenes.
Not available
S-EPMC10582120 | biostudies-literature
ProteomicsProfiling the interactome of oligonucleotide drugs by proximity biotinylation
Drug-ID applies proximity biotinylation to identify drug-protein interactions inside living cells. The covalent conjugation of a drug molecule with a biotin ligase enables targeted biotinylation of the drug-bound proteome and its identification by SILAC-MS/MS. We investigate the interactome of two w...
ORGANISM(S): Homo sapiens (Human) 
2024-01-09 | PXD045992 | Pride
Antisense oligonucleotide Basu Proximity biotinylation Drug protein interactome Live cell Biotin ligase Hdac inhibitors Silac In situ biotinylation Bet inhibitors Bioid 
UnknownStrong suppression of emission quenching in core quantum dots coupled to monolayer MoS2.
Not available
S-EPMC9419743 | biostudies-literature
ProteomicsTIM-3 Inhibition Enhances Tumor Progression and Metastasis: A Paradoxical Immune Checkpoint Response
Syngeneic breast tumors were developed by inoculating of 4T1 cells, into the left flank of female Balb/c mice. When tumor volume reached 200-250 mm3, mice were selected randomized way to receive the treatment of anti-TIM-3 monoclonal antibody (mAb) (Clone: RMT3-23, BioXcell, cat. # BE0115, RRID: AB...
ORGANISM(S): Mus musculus (Mouse) 
2025-12-29 | PXD065028 | Pride
Tnbc Brest Lc-ms Mice Tumor Tim-3 
ProteomicsRBC Proteomics of different types of Thalassemia subjects
10 patients with Hb E/ Beta Thalassemia with same genotype within 8 to 20 years of age and 5 healthy normal volunteer with age sex matched were selected for the RBC proteomics study.
ORGANISM(S): Homo sapiens (Human) 
2026-06-08 | PXD054385 | Pride
UnknownCorrelated protein conformational states and membrane dynamics during attack by pore-forming toxins.
Not available
S-EPMC6600976 | biostudies-literature
ProteomicsInhibition of the RNA exosome by chemically stabilized long antisense oligonucleotides
The protein interactions of ADAR-recruiting oligonucleotides inside the cellular environment was identified using the isASO-ID protocol and SILAC-MS/MS. We identified two exoribonucleases to bind differently to the oligonucleotides with respect to their 3’-terminal 2’-ribose modifications leading to...
ORGANISM(S): Homo sapiens (Human) 
2026-09-30 | PXD079777 | Pride
Antisense oligonucleotide Basu Proximity biotinylation Biotin ligase Silac Rna quality control In situ biotinylation Rna exosome 
UnknownInfluence of the oxygen atom acceptor on the reaction coordinate and mechanism of oxygen atom transfer from the dioxo-Mo(VI) complex, Tp(iPr)MoO(2)(OPh), to tertiary phosphines.
Not available
S-EPMC2897133 | biostudies-literature
ProteomicsUCHL3 regulates subgenomic flaviviral RNA condensates to promote virus propagation
Flavivirus subgenomic RNAs (sfRNAs) antagonise antiviral defences, yet how sfRNAs are organised and maintained in cells remains poorly understood. Here we identify ubiquitin C-terminal hydrolase L3 (UCHL3) as a post-translational regulator of flavivirus sfRNA stability and function. Using a proximit...
ORGANISM(S): Homo sapiens (Human) 
2026-09-07 | PXD075983 | Pride
Dengue virus Flavivirus Biomolecular condensates Uchl3 Sfrna Zika virus Subgenomic rna 
ProteomicsStereo-random Oligonucleotides Enable Efficient Recruitment of ADAR in vitro and in vivo
We used our previously published isASO-ID protocol to identify binders for two different adenosine deaminases acting on RNA- (ADAR-) recruiting antisense oligonucleotides (ONs). The ONs differed in their phosphorothioate content and their RNA editing potency and efficiency through the recruitment of...
ORGANISM(S): Homo sapiens (Human) 
2025-07-31 | PXD066763 | Pride
Antisense oligonucleotide Basu Drug protein interactome Rna editing Proximity biotinylation Biotin ligase Silac In situ biotinylation Adar-recruiting oligonucleotides 
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