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ProteomicsTitin BioID - protein and peptide pull-down
Proximity proteomics has greatly advanced the analysis of native protein complexes and subcellular structures in culture, but has not been amenable to study development and disease in vivo. Here, we generated a knock-in mouse with the biotin ligase (BioID) inserted at titin’s Z-disc region to identi...
ORGANISM(S): Mus musculus (Mouse) 
2020-05-18 | PXD017341 | Pride
Mouse Titin Biotinylation sites Bioid 
ProteomicsBioID samples ARS2/ARS2c1/ARS2c2
BioID data. LC-MS/MS. Hek293T cell line. Biotinylation
ORGANISM(S): Homo sapiens (Human) 
2022-04-04 | PXD026453 | Pride
Bioid data 
ProteomicsProximity-dependent biotin identification (BioID) reveals a dynamic LSD1-CoREST interactome during embryonic stem cell differentiation
Lysine specific demethylase 1 (LSD1/KDM1A) regulates gene expression as part of the CoREST complex, along with co-repressor of REST (CoREST) and histone deacetylase 1 (HDAC1). CoREST is recruited to specific genomic loci by components of the core complex and numerous transient interactions with chro...
ORGANISM(S): Mus musculus (Mouse) Homo sapiens (Human) 
2021-11-03 | PXD017344 | Pride
Embryonic stem cell Differentiation Bioid 
ProteomicsIdentification of proximal proteome of MRAS using BioID in U2OS cells
Identification of proximal proteome of MRAS WT and MRAS G22V using BioID in U2OS cells
ORGANISM(S): Homo sapiens (Human) 
2025-01-14 | PXD055944 | Pride
Bioid Mras 
ProteomicsBioID of PAX8 in human ovarian cancer cells
Investigation of interactors for the human transcription factor PAX8 using BioID-based proximity labeling, as described in Galli et al.
ORGANISM(S): Homo sapiens (Human) 
2021-03-09 | PXD021709 | Pride
Bioid Prdm3 Ovarian cancer Pax8 
ProteomicsPlasmodium falciparum Kelch13, Eps15 and Clathrin HC interactomes obtained using a dimerisation-induced quantitative BioID (DiQ-BioID)
In order to identify Kelch13 interaction partners in living P. falciparum parasites, we established a new type of BioID we termed dimerisation-induced quantitative BioID (DiQ-BioID) that takes advantage of the FKBP-FRB heterodimerisation system. For DiQ-BioID the target is endogenously tagged with F...
ORGANISM(S): Plasmodium falciparum 
2021-12-02 | PXD008219 | Pride
Eps15 Dimerisation-induced quantitative bioid (diq-bioid) Plasmodium falciparum Artemisinin resistance Vesicle trafficking Kelch13 Clathrin hc 
ProteomicsThe MYO6 interactome using BioID
The intracellular function of myosin motors requires a number of adaptor molecules, which control cargo attachment, but also fine-tune motor activity in time and space. These motor-adaptor-cargo interactions are often weak, transient or highly regulated. To overcome these problems we use a proximity...
ORGANISM(S): Homo sapiens (Human) 
2018-02-27 | PXD008686 | Pride
Myo6 Bioid 
ProteomicsTMEM16K is an interorganelle regulator of endosomal sorting.
Using proximity biotinylation proteomics based on TMEM16K/Ano10 (an endoplasmic reticulum lipid scramblase causative for spinocerebellar ataxia) BioID chimeras, we identify endosomal transport as a major functional cluster of interacting proteins.
ORGANISM(S): Homo sapiens (Human) Mus musculus (Mouse) 
2020-05-30 | PXD018990 | Pride
Bioid Endosomal sorting Tmem16k 
ProteomicsToxoplasma conoid proteome by BioID
Toxoplasma gondii, a widely prevalent human and animal pathogen and a relative of the malaria-causing Plasmodium spp., is a member of the phylum Apicomplexa encompassing a large number of single-celled eukaryotic organisms that are obligate endoparasites of animals. Apicomplexans evolved multiple ad...
ORGANISM(S): Toxoplasma gondii RH 
2021-09-09 | PXD022785 | Pride
Imc Apicomplexa Apical complex Bioid Pellicle Toxoplasma Plasmodium Conoid 
ProteomicsMap of the Kir2.1 interactome using BioID
Kir2.1, an inward rectifier potassium channel, plays an important role in controlling membrane potential specially in cardiomyocytes. Here we explore its interactome via proximity biotin labeling and affinity purification approach (BioID). First, BioID membrane controls were generated with randomly ...
ORGANISM(S): Homo sapiens (Human) 
2020-06-17 | PXD011004 | Pride
Kir2.1 Bioid Ats 
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