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ProteomicsQuest for missing proteins in the human spermatozoa: an update
Here, we report work as part of C-HPP initiatives on chromosomes 14 (France) and 2 (Switzerland) aiming to identify missing proteins in ejaculated human spermatozoa using multiple MS-based and antibodies-based validation approaches
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2017-03-31 | MSV000080826 | MassIVE
ProteomicsQuest for missing proteins in the human spermatozoa: an update
Here, we report work as part of C-HPP initiatives on chromosomes 14 (France) and 2 (Switzerland) aiming to identify missing proteins in ejaculated human spermatozoa using multiple MS-based and antibodies-based validation approaches
ORGANISM(S): Homo sapiens (Human) 
2016-07-26 | PXD003947 | Pride
Human Lc-srm Sperm Hpp Fractionation Ihc Missing proteins 
ProteomicsProteomic analysis of purified human centrosomes
Identification and comparison of protein content of 2 independently prepared fractions of human centrosomes.
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2017-03-29 | MSV000080747 | MassIVE
ProteomicsUPS1-yeast standard analysis - Technical Brief Calibration Plot for Proteomics (CP4P): A graphical tool to visually check the assumptions underlying FDR control in quantitative experiments
Label-free quantification of various concentrations of Universal Proteomic Standard (UPS1, Sigma-Aldrich) spiked in yeast extract.
ORGANISM(S): Homo sapiens (Human) Saccharomyces cerevisiae (Baker's yeast) 
2015-11-27 | PXD002370 | Pride
Proteomic standard Label-free Nanolc-ms/ms 
ProteomicsProteomic analysis of subchloroplastic compartments
Arabidopsis thaliana chlorosplasts extraction followed by subchloroplastic compartments fractionation (envelope, stroma, thylakoids). Afer SDS-PAGE separation and trypsin digestion, analysis of all gel bands twice by LC-MS/MS on a LTQ-FT
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2016-12-23 | PXD000136 | Pride
Sub compartments fractionation Chloroplast Ltq-ft Lc-ms/ms 
ProteomicsMollivirus sibericum infection cycle characterization
We describe a fourth type of giant virus infecting Acanthamoeba, Mollivirus sibericum, isolated from the same permafrost sample than Pithovirus sibericum.
ORGANISM(S): Mollivirus sibericum 
2017-12-08 | PXD002374 | Pride
Nanolc-ms/ms Virus Label-free quantification 
ProteomicsMS_HistoneDB, a manually curated resource for proteomic analysis of human and mouse histones
Histones and histone variants are essential components of the nuclear chromatin. While mass spectrometry has opened a large window to their characterization and functional studies, their identification from proteomic data remains challenging. Indeed, the current interpretation of mass spectrometry d...
ORGANISM(S): Mus musculus (Mouse) 
2017-01-11 | PXD005489 | Pride
Proteomics Mass spectrometry Histone Chromatin Histone variants 
ProteomicsFranco-Swiss HPP project (Chromosomes 2 and 14)
The dataset is a concatenation of nanoLC-MS/MS analyses performed on different sample types/sample preparations of human proteins on various instrumental platforms in the laboratory. A franco-swiss collaboration to identify missing human proteins on chromosomes 2 and 14 in the frame of the Human Pro...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2016-10-21 | MSV000080273 | MassIVE
ProteomicsComparison of ribosomes between control and dyskerin-depleted human cells
Dyskerin is a pseudouridine synthase involved in fundamental cellular processes (including rRNA and snRNA modification and telomere stabilization), whose function is altered in X-linked dyskeratosis congenita and cancer. Dyskerin role in ribosome processing was suggested to underlie the alterations...
ORGANISM(S): Homo sapiens (Human) 
2015-05-07 | PXD001274 | Pride
Translation   ribosomes   dyskerin   nanolc-ms/ms   label-free quantification 
ProteomicsNuclear nucleolin interactome analysis
Nucleolin (NCL) is a major component of the cell nucleolus, which has the ability to rapidly shuttle to several other cell’s compartments. NCL has been shown to play important roles in a variety of essential functions among which ribosome biogenesis, gene expression and cell growth. However, the pre...
ORGANISM(S): Homo sapiens (Human) 
2016-04-11 | PXD003554 | Pride
Tandem affinity purification Nucleolin Nanolc-ms/ms 
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