Coon Joshua J JJ

Show results for

Proteomics (48)
Metabolomics (2)
Other (1)

Organisms

Schizosaccharomyces pombe (23)
Sus scrofa domesticus (23)
Saccharomyces cerevisiae (23)
Staphylococcus aureus (23)
Rattus norvegicus (23)
Escherichia coli (23)
Homo sapiens (23)
Shigella flexneri (23)
Allexis (23)
Shigella (23)
Zea mays (23)
Listeria monocytogenes (23)
Entamoeba histolytica HM-1:IMSS-A (23)
Solanum tuberosum (23)
Arabidopsis thaliana (23)
Mus musculus (23)
Schizophyllum commune H4-8 (22)
Mycobacterium tuberculosis SP7 (22)
Oryza sativa Japonica Group (22)
Crotalus durissus terrificus (22)
Eriocheir sinensis (22)
Candidatus Endoriftia persephonae (22)
Mycobacterium tuberculosis SP10 (22)
Mycobacterium tuberculosis SP13 (22)
Cotesia typhae (22)
Mycobacterium tuberculosis SP22 (22)
Enterobacter ludwigii (22)
Corynebacterium diphtheriae bv. mitis str. ISS 3319 (22)
Olea europaea (22)
Homo sapiens (12)

Repository

pride (23)
PeptideAtlas (12)
MassIVE (7)
PAXDB (6)
GNPS (2)
GPMDB (1)

Tissue

Others (12)
Brain (5)
Permanent cell line cell (2)
Heart (2)
Cell culture (2)
Breast epithelium (1)
Flower (1)
Apical meristem (1)
Root nodule (1)
Stem (1)
Primary cell (1)
Seed (1)
Root (1)
Blood cell (1)
Blood plasma (1)
Leaf (1)
Liver (1)

Disease

Disease free (2)
Not Available (1)
Breast cancer (1)

Technology Type

Mass Spectrometry (23)
Shotgun proteomics (20)
Affinity purification coupled with mass spectrometry proteomics (2)
Olink affinity proteomics (1)
Affinity proteomics (1)
Bottom-up proteomics (1)
Data-dependent acquisition (1)
Data-independent acquisition (1)

Instrument Platform

LTQ Orbitrap Velos (12)
Q Exactive HF (5)
Orbitrap Fusion Lumos (3)
Orbitrap Eclipse (3)
Q Exactive GC-MS Orbitrap (Thermo Scientific) (2)
Instrument (1)
TSQ Quantiva (1)
Orbitrap Eclipse (Thermo Scientific instrument model) (1)
Orbitrap Ascend (1)
Q Exactive GC Orbitrap (1)
Orbitrap Astral (1)

Publication Date

2011 (12)
2020 (10)
2016 (9)
2019 (6)
2021 (4)
2022 (2)
2025 (2)
2023 (1)
2024 (1)
2018 (1)
2017 (1)

UNIPROT ID/AC

G7IDE5_MEDTR (6)
A0A072VQN0_MEDTR (6)
G7K0T1_MEDTR (6)
G7II48_MEDTR (6)
G7I9Z6_MEDTR (6)
G7JIX5_MEDTR (6)
3880.AES67519 (6)
G7K6I4_MEDTR (6)
G7J9Y3_MEDTR (6)
G7J5D7_MEDTR (6)
G7L1R5_MEDTR (6)
A2Q3B1_MEDTR (6)
G7KCJ8_MEDTR (6)
G7JKP3_MEDTR (6)
G7KNF5_MEDTR (6)
I3SKT5_MEDTR (6)
G7KJ82_MEDTR (6)
G7KTB1_MEDTR (6)
G7JUZ2_MEDTR (6)
3880.AES67535 (6)
G7KE81_MEDTR (6)
G7IVW0_MEDTR (6)
G7J7W0_MEDTR (6)
G7L8T1_MEDTR (6)
G7KWT1_MEDTR (6)
G7L7X6_MEDTR (6)
G7KVX6_MEDTR (6)
G7IWS3_MEDTR (6)
G7JYM2_MEDTR (6)
G7J2W7_MEDTR (6)

ENSEMBL ID

ENSG00000247315 (10)
ENSG00000170477 (4)
ENSG00000204131 (2)
ENSG00000147251 (1)

Lab affiliation

University of Wisconsin - Madison (3)
Department of Chemistry and Biomolecular Chemistry, University of Wisconsin, Wisconsin, USA (2)
Professor of Biomolecular Chemistry at the University of Wisconsin - Madison (2)
Dept of Biomolecular Chemistry Univ of Wisconsin - Madison Madison WI USA (1)
Department of Biomolecular Chemistry and Department of Chemistry, University of Wisconsin-Madison, Madison, WI, USA. Morgridge Institute for Research, Madison, WI (1)
Professor, Biomolecular Chemistry and Chemistry at University of Wisconsin - Madison (1)
Professor of Biomolecular Chemistry and Chemistry at University of Wisconsin-Madison (1)
Kelly: Diabetes and Obesity Research Center, Sanford-Burnham Medical Research Institute, Orlando, Florida, USA. Coon: Department of Chemistry, University of Wisconsin-Madison, Madison, WI 53706, USA Department of Biomolecular Chemistry, University of Wisconsin-Madison, Madison, WI 53706, USA Genome Center, University of Wisconsin-Madison, Madison, WI 53706, USA (1)
Professor of Biomolecular Chemistry and Chemistry at University of Wisconsin, Madison, USA (1)
University of Wisconsin - Madison, Morgridge Institute for Research (1)
University of Wisconsin, Departments of Chemistry and Biomolecular Chemistry Morgridge Institute for Research (1)
Department of Chemistry, University of Wisconsin–Madison, Madison, WI 53706, USA Morgridge Institute for Research, Madison, WI 53715, USA Genome Center of Wisconsin, Madison, WI 53706, USA Department of Biomolecular Chemistry, University of Wisconsin–Madison, Madison, WI 53706, USA (1)
Professor of Biomolecular Chemistry at the University of Wisconsin-Madison (1)
Department of Chemistry, College of Letters & Science, University of Wisconsin-Madison, Madison, WI, 53706 Department of Biomolecular Chemistry, School of Medicine and Public Health, University of Wisconsin-Madison, Madison, WI, 53706 (1)
Department of Biomolecular Chemistry and Department of Chemistry, University of Wisconsin-Madison, Madison, WI, USA (1)
UW Madison (1)
University of Wisconsin Madison (1)
University of Wisconsin-Madison, Department of Chemistry (1)
University of Wisconsin-Madison (1)

Previous page
1 / 6
You're on page 1
page 2
page 3
page 4
page 5
page 6
Next page

Sort by:

Relevance

Page size

Pptc7 is an essential phosphatase for promoting mammalian mitochondrial metabolism and biogenesis

Mitochondrial proteins are replete with phosphorylation; however, the origin, abundance, and functional relevance of these modifications are largely unclear. Nonetheless, mitochondria possess multiple resident phosphatases, suggesting that protein dephosphorylation may be broadly important for mitoc...

ORGANISM(S): Mus musculus (Mouse)

2019-05-29 | PXD012743 | Pride

Interactive Peptide Spectral Annotator Experimental Data

Abstract Here we present IPSA, an innovative web-based spectrum annotator that visualizes and characterizes peptide tandem mass spectra. A tool for the scientific community, IPSA can visualize peptides collected using a wide variety of experimental and instrumental configurations. Annotated spectra ...

ORGANISM(S): Mus musculus (Mouse) Saccharomyces cerevisiae (Baker's yeast)

2019-05-15 | PXD011695 | Pride

Netd Ethcd Hcd Etcad Shotgun proteomics Etd Ai-etd Ai-etd+

Physiological and Metabolic Responses of Zymomonas mobilis to Lignocellulosic Hydrolysate

This study provides a systems-level evaluation of how Zymomonas mobilis responds to hydrolysate stress, revealing distinct physiological and lipid membrane remodeling responses.

ORGANISM(S): Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821

2025-08-05 | PXD066951 | Pride

Lc-ms Lignocellulosic hydrolysate Zymomonas mobilis

LC-MS/MS analysis of Medicago truncatula and Sinorhizobium meliloti

In this resource we describe a large-scale, quantitative proteomic study, including key posttranslational modifications, to establish the first global proteomic blueprint of a legume and its rhizobial endosymbiont (www.compendium.medicago.wisc.edu).

ORGANISM(S): Medicago truncatula (Barrel medic) (Medicago tribuloides) Sinorhizobium meliloti (strain BL225C)

2016-10-10 | PXD002692 | Pride

Symbiosis Ptm Medicago Rhizobia

A Technical Evaluation of Plasma Proteomics Technologies

We report a technical evaluation of six notable plasma proteomics technologies from recent years. Unenriched plasma, perchloric acid depletion, PreOmics ENRICHplus, Mag-Net, Seer Proteograph XT, and Olink Explore HT. The methods were compared on proteomic depth, reproducibility, linearity, tolerance...

ORGANISM(S): Homo sapiens (Human)

2025-05-12 | PAD000002 | Pride

Affinity proteomics O-link

A proteomics search algorithm specifically designed for high-resolution tandem mass spectra.

Data from the authors [[www.chem.wisc.edu/~coon/Downloads/Morpheus web site]]. Experiment: yeast cad, file: 2010-12-05_Yeast_Trypsin_IT_CAD_Rep4.mgf. Published as part of J Proteome Res. 2013 Mar 1;12(3):1377-86 [[http://www.ncbi.nlm.nih.gov/pubmed/23323968 PubMed]]. From the Abstract: {{i}} ... For...

ORGANISM(S): Yeast

GPM11210018150 | GPMDB

Proteomic Atlas of the Human Brain in Alzheimer’s Disease

Here we provide a proteomic resource comprising nine functionally distinct sections from three individuals clinically diagnosed with Alzheimer's disease, across a spectrum of disease progression. Using state-of-the-art mass spectrometry, we identify a core brain proteome that exhibits only small var...

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2021-11-16 | MSV000088398 | MassIVE

Proteomic Atlas of the Human Brain in Alzheimer’s Disease

ORGANISM(S): Homo sapiens (Human)

2020-01-09 | PXD012131 | Pride

Brain Alzheimer's Human Neurodegeneration

Mouse Oncogenes Keratinocytes Proteomics

Raw files deposited for the mouse keratinocytes proteomics

ORGANISM(S): Mus Musculus (ncbitaxon:10090)

2022-05-07 | MSV000089441 | MassIVE

Proteomics needs better chromatography

Examination of relationship between chromatographic peak capacity and MS/MS scan rate.

ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast)

2016-12-13 | PXD004126 | Pride

Yeast Fusion lumos Shotgun

Previous page
1 / 6
You're on page 1
page 2
page 3
page 4
page 5
page 6
Next page