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ProteomicsC. rodentium remodels metabolism in IEC
The mechanisms by which the mouse pathogen Citrobacter rodentium triggers effacement of the brush border microvilli, colitis, hyperplasia and dysbiosis remain poorly understood. We investigated the impact of C. rodentium infection on the proteomic and metabolic landscapes of intestinal epithelial ce...
ORGANISM(S): Citrobacter rodentium Mus musculus (Mouse) 
2018-01-10 | PXD005004 | Pride
Colon Lc-msms Citrobacter rodentium Mouse Tmt Phosphorylation 
UnknownTenascin-C activation of lung fibroblasts in a 3D synthetic lung extracellular matrix mimic.
Not available
S-EPMC9980292 | biostudies-literature
TranscriptomicsRNA-Seq of C. rodentium
Whole genome trancription study of Citrobacter rodentium grown in rich media.
ORGANISM(S): Citrobacter rodentium 
2011-02-12 | E-MTAB-502 | biostudies-arrayexpress
ProteomicsGPR35 promotes glycolysis, proliferation and oncogenic signalling by engaging with the sodium potassium pump
We used human embryonic kidney HEK293T cells transfected with human GPR35 cDNAs as baits that were engineered to express Strep or hemagglutinin (HA) tags at the C terminus to perform an unbiased proteomics survey for GPR35 interaction partners.
ORGANISM(S): Homo sapiens (Human) 
2019-11-12 | PXD011269 | Pride
Gpr35  na/k atpase 
ProteomicsMulti-omics analysis reveals concerted molecular responses to heat stress in a “red tide” dinoflagellate
Harmful algal blooms are induced largely by nutrient enrichment common in warm waters. An increasingly frequent phenomenon is the “red tide”: blooms of dinoflagellate microalgae that accumulate toxins lethal to other organisms in high doses. Here, we present the de novo assembled genome (~4.75 Gbp) ...
ORGANISM(S): Prorocentrum cordatum 
2023-10-18 | PXD046193 | Pride
Harmful algal bloo Prorocentrum cordatum Dinoflagellate 
UnknownRegulation of innate and adaptive antitumor immunity by IAP antagonists.
Not available
S-EPMC6462841 | biostudies-literature
UnknownPhylogenomic analysis of gastroenteritis-associated <i>Clostridium perfringens</i> in England and Wales over a 7-year period indicates distribution of clonal toxigenic strains in multiple outbreaks and extensive involvement of enterotoxin-encoding (CPE) plasmids.
Not available
S-EPMC6861862 | biostudies-literature
ProteomicsExploiting induced pluripotent stem cell-derived macrophages to unravel host factors influencing Chlamydia trachomatis pathogenesis
Chlamydia trachomatis remains a leading cause of bacterial sexually transmitted infections and preventable blindness worldwide. There are, however, limited in vitro models to study the role of host genetics in the response of macrophages to this obligate human pathogen. Here, we describe an approach...
ORGANISM(S): Chlamydia trachomatis Homo sapiens (Human) 
2018-02-14 | PXD005858 | Pride
Tmt Chlamydia Ips cells Lc-msms 
UnknownGenomic analysis on broiler-associated <i>Clostridium perfringens</i> strains and exploratory caecal microbiome investigation reveals key factors linked to poultry necrotic enteritis.
Not available
S-EPMC7000242 | biostudies-literature
UnknownTargeted restoration of the intestinal microbiota with a simple, defined bacteriotherapy resolves relapsing Clostridium difficile disease in mice.
Not available
S-EPMC3486913 | biostudies-literature
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