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TranscriptomicsExpression data from human NHL cell lines treated with agonistic antibodies
CD20 is a clinically validated target for Non-Hodgkin’s lymphomas and autoimmune diseases. Interactions of CD20 with the B cell receptor (BCR) and components of the BCR signaling cascade have been reported. In this study we show that antibodies against CD20 or activation of the BCR by specific antib...
ORGANISM(S): Homo sapiens 
2013-07-23 | E-GEOD-23394 | biostudies-arrayexpress
ProteomicsEnvironment-driven changes of mRNA and protein levels in Pseudomonas aeruginosa
LFQ proteome datasets of Pseudomonas aeruginosa type strain PA14 cultured at different enviromental conditions: Exponential-, transition- and stationary(12 h and 24 h)growth phases. Biofilm (24 h and 48 h), low osmolarity conditions (control = exponential phase), iron starvation and respective contr...
ORGANISM(S): Pseudomonas aeruginosa (strain UCBPP-PA14) 
2018-11-20 | PXD010200 | Pride
Transcriptome Mass spectrometry Proteome Post-transcriptional regulation Random forest prediction Label-free quantification of proteins 
TranscriptomicsDifferent effects of IL-13 and IL-4 on Mφ in the presence of IL-10
Tumor-associated macrophages (TAM) represent an abundant cell population of the immune infiltrate in solid tumors and have been shown to orchestrate escape from immune surveillance. Macrophages display a very plastic phenotype which is recapitulated in vitro by classifying certain subsets according ...
ORGANISM(S): Homo sapiens 
2016-08-06 | E-GEOD-85260 | biostudies-arrayexpress
ProteomicsThe immunopeptidome of HLA-DR from PBMC
Quantifiying the impact of initial cell counts on the identified HLA-DR immunopeptidome of PBMC.
ORGANISM(S): Homo sapiens (Human) 
2021-08-23 | PXD023032 | Pride
Pbmc Hla-ii Immunopeptidome Human blood Hla-dr 
GenomicIMAGE II Genome-Wide Association

This sample represents a collection of cases across a range of sites. All of these samples were ascertained for ADHD with most meeting criteria for combined type ADHD. The collection sites span Europe and America. Further details on the source and inclusion and exclusion information can be found ...

phs000407 | dbGaP
TranscriptomicsGene expression of T follicular helper (TFH) cells 6 h after ICOS-L blockade
The maintenance of the TFH phenotype depends on continuous signals via ICOS. For a global assessment of differences in gene expression after interruption of the ICOS pathway a genome wide transcriptome analysis was performed. We used the OT-II adoptive transfer system to isolate antigen-specific TFH...
ORGANISM(S): Mus musculus 
2015-01-19 | E-GEOD-49314 | biostudies-arrayexpress
GenomicsInternational Multi-Center ADHD Gene Project (IMAGE) II Case Sample

This sample represents a collection of cases across a range of sites. All of these samples were ascertained for ADHD with most meeting criteria for combined type ADHD. The collection sites span Europe and America. Further details on the source and inclusion and exclusion information can be found ...

phs000407.v1.p1 | EGA
GenomicsThe PUWMa (Pfizer-funded study from the University of California Los Angeles (UCLA), Washington University (WASH-U), and Massachusetts General Hospital (MGH)) GWAS of ADHD

The PUWMa GWAS of ADHD is a multi-site collaboration initiated to conduct a family-based association study from existing research samples. The source sample of ADHD families was ascertained at Massachusetts General Hospital (MGH, N=309 trios), Washington University at St. Louis (WASH-U, N...

phs000358.v1.p1 | EGA
TranscriptomicsCharacterization of perivascular MSC from the adult human brain
Brain perivascular cells have been recently identified as new mesodermal cell type of the human brain. These cells reside in the perivascular niche and were shown to have mesodermal and – to a lesser extend – tissue-specific differentiation potential. Mesenchymal stem cells (MSCs) are widely dis...
ORGANISM(S): Homo sapiens 
2015-11-03 | E-GEOD-62505 | biostudies-arrayexpress
TranscriptomicsAlterations in cardiac DNA methylation in human dilated cardiomyopathy
This project analyzes genome-wide cardiac DNA methylation in patients with idopathic DCM and control individuals Given are datafiles from n = 8 controls (patients after Htx) and n = 9 patients with idopathic DCM. The datasets have been normalized together with other beadchip files not subject to thi...
ORGANISM(S): Homo sapiens 
2012-12-18 | E-GEOD-42510 | biostudies-arrayexpress
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