Sort   by:  
 Page size 
ProteomicsAn H3K4me3 reader recruits the positive transcription elongation factor B complex to facilitate transcription elongation
Transcription by RNA polymerase II (Pol II) is a tightly regulated process in eukaryotes. A recent study revealed that the trimethylation of histone H3 at lysine 4 (H3K4me3) activates gene expression by promoting Pol II pause-release and transcription elongation rather than transcription initiation....
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2026-01-27 | PXD061239 | Pride
Transcription elongation  h3k4me3  p-tefb  salicylic acid  arabidopsis  root 
Proteomicsthe interactome of H3K4me3 in RAW264.7 cells
Label-free quantitative (LFQ) mass spectrometry to determine the interactome of H3K4me3 in native HeLa cells
ORGANISM(S): Mus musculus (Mouse) 
2024-11-21 | PXD055061 | Pride
H3k4me3 reader 
Proteomicsthe interactome of H3K4me3 in HeLa cells
description: Label-free quantitative (LFQ) mass spectrometry to determine the interactome of H3K4me3 in native HeLa cells
ORGANISM(S): Homo sapiens (Human) 
2024-11-21 | PXD055058 | Pride
H3k4me3 reader 
GenomicsGenome-wide maps of KDM5 binding in drosophila adults
To determine which genes affected by loss of KDM5 in adults were direct targets, we carried out KDM5 ChIP-seq analyses. To valide this data, we utilized a previously generated fly strain in which the sole source of KDM5 is from a transgene expressing an HA tagged form of KDM5 expressed under the co...
ORGANISM(S): Drosophila melanogaster 
2015-12-22 | E-GEOD-70589 | biostudies-arrayexpress
UnknownDual recognition of H3K4me3 and H3K27me3 by a plant histone reader SHL.
Not available
S-EPMC6013494 | biostudies-literature
ProteomicsThe epigenetic reader Phf2 is positioned in the genome by cohesin
Eukaryotic genomes are assembled into chromatin by histones and extruded into loops by cohesin. These mechanisms control important genomic functions, but whether histones and cohesin cooperate in genome regulation is poorly understood. Here we identify Phf2, a member of the Jumonji-C family of histo...
ORGANISM(S): Mus musculus (Mouse) 
2024-12-18 | PXD057926 | Pride
Cohesin Genome regulation Phf2 Epigenetic reader 
ProteomicsEBS is a bivalent histone reader that regulates floral phase transition in Arabidopsis
The ability of cells to perceive and translate versatile cues into differential chromatin and transcriptional states is critical for many biological processes1-4. In plants, timely transition to a flowering state is crucial for successful reproduction5-7. EARLY BOLTING IN SHORT DAY (EBS) is a negati...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2019-09-09 | PXD009794 | Pride
Histone Arabidopsis Chromatin 
GenomicsGenome wide localization of chromatin bound NUP98-PHF23 (NP23)
We analyzed the genome wide localization of H3K4me3, H3K27me3 and the NUP98-PHF23 (with V5 tag) fusion protein which binds H3K4me3 via its PHD finger, using ChIP-seq. Results correlated with gene expression profiles. NUP98-PHF23 bound only 1.6% of H3K4me3 marks including Hoxa/b + Meis1. Assess H3K4m...
ORGANISM(S): Mus musculus 
2014-03-06 | E-GEOD-54786 | biostudies-arrayexpress
ProteomicsPlasmodium falciparum bromo-domain containing epigenetic protein complexes recruited to modified histone tails as identified by histone peptide pulldown (HPP)-MS/MS and further characterized by GFP-IP-MS/MS and HA-IP-MS/MS
In order to identify epigenetic protein complexes recruited to histone PTMs in the deadly human malaria parasite Plasmodium falciparum, we set out to perform histone peptide pulldowns with various histone peptides. Biotinylated peptides corresponding to P. falciparum histone variant H2A.Z, H2B.Z and...
ORGANISM(S): Plasmodium falciparum 
2019-10-15 | PXD010644 | Pride
Epigenetic complex Bromo-domain protein Hpp Gcn5 Gfp-ip Histone peptide pulldown Interactor Plasmodium falciparum Taf1 Histone acetylation Ha-ip Reader complex Histone methylation 
UnknownAn H3K4me3 reader, BAP18 as an adaptor of COMPASS-like core subunits co-activates ERα action and associates with the sensitivity of antiestrogen in breast cancer.
Not available
S-EPMC7641737 | biostudies-literature
Sort   by:  
 Page size