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ProteomicsHuman Serum Immunoglobulin N-Glycosylation using nLC-MS/MS
Here we employ a nLC-MS/MS method to separate small amounts of purified immunoglobulins to characterize the N-glycan reportoire and site occupancy of bulk serum antibodies. Using this method, we have established, for the first time within individual donors, the N-linked glycan repotoire for bulk IgG...
ORGANISM(S): Homo sapiens (Human) 
2019-01-24 | PXD010911 | Pride
Human Igm Serum N-glycosylation Iga2 Iga1 Glycopeptides Igg1 Igg4 Immunoglobulins 
ProteomicsAGP nLC-MS/MS and nLC-FAIMS-MS/MS
Bottom-up nLC-MS/MS glycoprotein mass spectrometry workflows rely on the generation of a mixture of unmodified and glycosylated peptides via proteolysis. Such methods are challenged by suppression of hydrophilic glycopeptide ions by more abundant, hydrophobic, and readily ionizable unmodified peptid...
ORGANISM(S): Homo sapiens (Human) 
2023-03-11 | PXD036667 | Pride
N-glycopeptide High-field asymmetric waveform ion mobility spectrometry Glycoproteomics Agp Alpha-1-acid glycoprotein Faims 
MetabolomicsUncovering the Complexity of the Yeast Lipidome by Means of nLC/NSI-MS/MS
Saccharomyces cerevisiae is a eukaryotic model organism widely used for the investigation of fundamental cellular processes and disease mechanisms. Consequently, the lipid landscape of yeast has been extensively investigated and up to this day the lipidome is considered as rather basic. Here, we use...
2021-01-08 | MTBLS2119 | MetaboLights
UnknownTwo-Dimensional-PAGE Coupled with nLC-MS/MS-Based Identification of Differentially Expressed Proteins and Tumorigenic Pathways in MCF7 Breast Cancer Cells Transfected for JTB Protein Silencing.
Not available
S-EPMC10673289 | biostudies-literature
ProteomicsProteomic analysis of distinct regions of human carotid atherosclerotic plaques
Protein profiles were determined from different distinct regions of human atherosclerotic plaques, including: internal control, fatty streak, plaque shoulder, plaque centre, and fibrous cap. Protein extracts from all 5 regions, from 3 men and 3 women, were separated by two-dimensional gel electropho...
ORGANISM(S): Homo sapiens (Human) 
2016-05-24 | PXD003930 | Pride
Human Carotid artery Ms/ms Peptide mass fingerprinting Atherosclerosis 
Proteomics2D-PAGE coupled with nLC-MS/MS-based identification of differentialy expressed proteins and tumorigenic pathways in MCF7 breast cancer cell line transfected for JTB protein silencing
Identification of new cancer-associated genes/proteins, characterization of their expression vari-ation, the interactomics-based assessment of differentially expressed genes/proteins (DEGs/DEPs), and understanding the tumorigenic pathways and biological processes involved in BC genesis and progressi...
ORGANISM(S): Homo sapiens (Human) 
2024-01-26 | PXD046265 | Pride
Breast cancer (bc)  mcf7  jtb protein silencing  overexpressed jtb-interactome  downregulated jtb-interactome  tumorigenic pathways 
ProteomicsSite-Specific Glycosylation Analysis of Murine and Human Fcɣ Receptors IIA and IIB.
Site-specific glycosylation analysis by nLC-MS/MS of recombinant human Fcγ receptors IIA (H&R167 isoforms), IIB and murine Fcγ receptor IIB.
ORGANISM(S): Mus musculus (Mouse) Homo sapiens (Human) 
2024-08-10 | PXD049429 | Pride
Relative abundance. N-glycosylation  o-glycosylation  mass spectrometry  glycoproteomic  fcγ receptor 
ProteomicsHuman cerebral organoid proteome
We investigated temporal proteomic changes of human cerebral organoids during neuroanl differentiations. TMT-based quantitative proteomics analysis of cerebral organoids at multiple time potins (day 0, 25, 43, 70 and 120) was performed using two-dimensional nanoflow liquied chromatography-tandem mas...
ORGANISM(S): Homo sapiens (Human) 
2024-03-15 | PXD041173 | Pride
Cerebral organoid Human Lc-ms/ms 
ProteomicsAnalysis of EYA3 phosphorylation by Src kinase
Data-dependent nLC-MS/MS analysis of EYA3 phosphorylation by Src protein tyrosine kinase
ORGANISM(S): Homo sapiens (Human) 
2019-12-17 | PXD016518 | Pride
Tyrosine phosphorylation Eya3 Nlc-ms/ms Src 
ProteomicsAnalysis of EYA3 phosphorylation by Src kinase
Data-dependent nLC-MS/MS analysis of EYA3 phosphorylation by Src protein tyrosine kinase
ORGANISM(S): Homo sapiens (Human) 
2019-12-17 | PXD016520 | Pride
Tyrosine phosphorylation Eya3 Nlc-ms/ms Src 
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