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ProteomicsProteome from Wdr7 iKO MEFs
Post-nuclear supernatants from Wdr7 iKO MEFs were analyzed.
ORGANISM(S): Mus musculus (Mouse) 
2026-06-25 | PXD070900 | Pride
Mefs V-atpases Lysosomes Iko Lysosomal enzymes Wdr7 
ProteomicsSecretome from Wdr7 iKO MEFs
Extracellular medium was collected from Wdr7 iKO MEFs after 24h in OptiMEM, and secreted proteins were analyzed.
ORGANISM(S): Mus musculus (Mouse) 
2026-06-25 | PXD070740 | Pride
Mefs Secreted proteins Secretome Lysosomes Iko Wdr7 Lysosomal enzymes 
ProteomicsLyso-IP from Wdr7 iKO MEFs
Lysosomes were enriched from Wdr7 iKO MEFs stably expressing TMEM192-3xHA (Bait) or TMEM192-2xFlag (Ctrl) via lysosomal immunoprecipitation (Lyso-IP) using PierceTM anti-HA magnetic beads to analyze changes in the lysosomal protein content upon induced depletion of Wdr7.
ORGANISM(S): Mus musculus (Mouse) 
2026-06-25 | PXD070950 | Pride
Lyso-ip Mefs V-atpase Tmem192 Lysosomes Iko Wdr7 
GenomicsH2B CUT&RUN in WT and ATF3 iKO satellite cells
H2B CUT&RUN in WT and ATF3 iKO satellite cells
PRJNA844383 | ENA
GenomicsNanopore sequencing of Ogt iKO and control mouse embryonic stem cells
Nanopore sequencing of Ogt iKO and control mouse embryonic stem cells
PRJEB67735 | ENA
GenomicsRNA-seq in WT and ATF3 iKO satellite cells with 3 replicates mix
RNA-seq in WT and ATF3 iKO satellite cells with 3 replicates mix
PRJNA844365 | ENA
GenomicsATAC-seq analysis in Rpsa-iKO RAW264.7 cells after HSV-1 infection
ATAC-seq analysis in Rpsa-iKO RAW264.7 cells after HSV-1 infection
PRJNA842689 | ENA
GenomicsH2B CUT&RUN in WT and ATF3 iKO satellite cells
H2B binding profiling analysis of ChIP-seq data for WT and ATF3-iKO satellite cells
ORGANISM(S): Mus musculus 
2022-06-06 | GSE205324 | GEO
GenomicsExpression profiling of Ythdc2 ht and Ythdc2 iKO pachytene spermatocytes in mouse.
Expression profiling of Ythdc2 ht and Ythdc2 iKO pachytene spermatocytes in mouse.
PRJNA701283 | ENA
GenomicsExtensive ChIP-seq analysis for VDR, pCREB, H3K4me1, H3K9ac, H3K36me3 from kidney, thyroparathyroid (TPTG), and peripheral blood monocytes (pBMCs) from wildtype (C57BL/6), M1-IKO, M21-IKO, VDR-KO, and Cyp27b1-KO mice.
Extensive ChIP-seq analysis for VDR, pCREB, H3K4me1, H3K9ac, H3K36me3 from kidney, thyroparathyroid (TPTG), and peripheral blood monocytes (pBMCs) from wildtype (C57BL/6), M1-IKO, M21-IKO, VDR-KO, and Cyp27b1-KO mice.
PRJNA549707 | ENA
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