Liao Pan P - OmicsDI

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Unknown (400)
Proteomics (20)
Transcriptomics (19)
Metabolomics (5)

Organisms

Xanthomonas translucens (13)
Chaetodon lunulatus (13)
Cupriavidus basilensis (13)
Paracentrotus lividus (13)
Amphibalanus amphitrite (13)
Acanthamoeba polyphaga mimivirus (13)
Cyprinus carpio (13)
Halorubrum lacusprofundi ATCC 49239 (13)
Insecta (13)
Limosilactobacillus mucosae LM1 (13)
Acanthamoeba polyphaga (13)
Tepidimicrobium xylanilyticum (13)
Aiptasia (13)
Tepidanaerobacter acetatoxydans (13)
Methanothermobacter thermautotrophicus (13)
Acetomicrobium mobile (13)
Acetivibrio thermocellus (13)
Thermoclostridium stercorarium (13)
Mycolicibacterium smegmatis (13)
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Pseudomonas aeruginosa PA14 (13)
Homo sapiens (8)
Mus musculus (4)
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Caenorhabditis elegans (2)
Synechocystis salina (1)
Bos grunniens (1)
Rubus idaeus (1)
Nicotiana tabacum (1)
Salmo salar (1)

Repository

biostudies-arrayexpress (19)
pride (13)
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Tissue

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Disease

Non-alcoholic steatohepatitis (1)
Cervix carcinoma (1)
Malaria (1)
Acute leukemia (1)

Technology Type

Mass Spectrometry (13)
Shotgun proteomics (5)
Mass spectrometry (4)
SWATH MS (3)
Bottom-up proteomics (2)
Mass spectrometry assay (1)
Proteogenomics (1)
SRM/MRM (1)
Gel-based experiment (1)
Data-dependent acquisition (1)
Affinity purification coupled with mass spectrometry proteomics (1)

Instrument Platform

Illumina NovaSeq 6000 (4)
Q Exactive Plus (3)
Illumina HiSeq 2500 (2)
NextSeq 500 (2)
Liquid Chromatography MS - negative - hilic (2)
Liquid Chromatography MS - positive - hilic (2)
Liquid Chromatography MS - positive - reverse phase (2)
Liquid Chromatography MS - negative - reverse phase (2)
Qiagen RNAeasy, Bioanalyzer QubitFluorometer, Agilent 2100, RNA Pico 6000 chip (1)
Agilent Bioanalyzer (1)
Not applicable (1)
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DNBSEQ-G400 (1)
Illumina HiSeq 1000 (1)
NextSeq 550 (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid Chromatography MS - negative - reverse-phase (1)
LTQ (1)

Publication Date

2025 (8)
2026 (6)
2012 (6)
2020 (6)
2022 (5)
2021 (4)
2024 (3)
2013 (1)
2019 (1)
2017 (1)
2010 (1)

CHEBI ID

CHEBI:64561 (2)
CHEBI:64563 (2)
CHEBI:193499 (1)
CHEBI:193498 (1)
CHEBI:193497 (1)
CHEBI:193496 (1)
CHEBI:193508 (1)
CHEBI:193495 (1)
CHEBI:189758 (1)
CHEBI:193494 (1)
CHEBI:193493 (1)
CHEBI:193492 (1)
CHEBI:186265 (1)
CHEBI:193491 (1)
CHEBI:193490 (1)
CHEBI:193488 (1)
CHEBI:193487 (1)
CHEBI:193486 (1)
CHEBI:175663 (1)
CHEBI:175642 (1)
CHEBI:185982 (1)
CHEBI:186007 (1)
CHEBI:193484 (1)
CHEBI:193483 (1)
CHEBI:193480 (1)
CHEBI:190314 (1)
CHEBI:193478 (1)
CHEBI:169305 (1)
CHEBI:193477 (1)
CHEBI:193476 (1)

Metabolite Name

13,14-dihydro-15-keto Prostaglandin D1 (2)
2-Hydroxyestradiol (2)
Isorhamnetin (2)
Quercetin (2)
Mycophenolic acid (2)
Quinolinic acid (2)
Gamma-Glutamyltyrosine (2)
N-Acetylneuraminic acid (2)
Jasmonic acid (2)
Citric acid (2)
Tetradecanedioic acid (2)
Porphobilinogen (2)
Maltotriose (2)
L-Tryptophan (2)
Hexadecanedioic acid (2)
Deoxyinosine (2)
Azelaic acid (2)
Guanosine (2)
Uridine (2)
Pseudouridine (2)
Ï«-Cyclodextrin (1)
PC O-18:1_16:0 (1)
LNAPE 22:4/N-18:0 (1)
LNAPE 16:0/N-20:0 (1)
PE O-18:0_22:4 (1)
PE O-17:1_22:6 (1)
PC O-18:0_22:6 (1)
19(R)-Hydroxy prostaglandin F2Ï« (1)
6Ï«-Prostaglandin I1 (1)
Ï«-D-Glucose-1,6-bisphosphate (1)

Modification

42.010565 (1)
15.994915 (1)
57.021464 (1)

Study type

RNA-seq of coding RNA (12)
Transcription profiling by array (5)
RNA-seq of total RNA (2)

Release Date

2025 (77)
2024 (58)
2022 (55)
2023 (54)
2021 (43)
2020 (29)
2019 (19)
2017 (18)
2026 (14)
2016 (11)
2013 (8)
2012 (8)
2015 (8)
2014 (8)
2018 (6)
2011 (1)
2005 (1)
2003 (1)

Lab affiliation

Plant Molecular Biology Laboratory, School of Biological Sciences, the University of Hong Kong (1)
Sugarcane Research Institute, Guangxi Academy of Agricultural Sciences (1)
Department of Integration of Chinese and Western Medicine, School of Basic Medical Sciences, Peking University, 38 Xueyuan Road, Beijing 100191, People’s Republic of China (1)
National Yang-Ming University Proteomics Research Center (R648), Taipei, 112 Taiwan (ROC) (1)
Guangdong Institute of Microbiology, Guangdong Academy of Sciences (1)
Joint International Research Laboratory of Metabolic & Developmental Sciences, Key Laboratory of Urban Agriculture (South) Ministry of Agriculture, Plant Biotechnology Research Center, Fudan-SJTU-Nottingham Plant Biotechnology R&D Center, School of Agriculture and Biology, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai 200240, P. R. China (1)
Joint Proteomics Facility (1)
Department of Dermatology, Second Affiliated Hospital of Naval Medical University, Shanghai，200003, China (1)
University of Oxford University of Utrecht (1)
State Key Laboratory of Oncology in South China, Guangdong Provincial Clinical Research Center for Cancer, Sun Yat-sen University Cancer Center, Guangzhou 510060, China (1)
Department of Cardiology, Renmin Hospital of Wuhan University, Wuhan 430060, China (1)
Plant molecular biology laboratory, School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China (1)
National Yang-Ming University Proteomics Research Center,Taiwan (1)

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Maintenance of Neural Activities in Torpid Rhinolophus ferrumequinum Bats Revealed by 2D Gel-based Proteome Analysis

Bats are the only mammals capable of self-powered flying. Many bat species hibernate in winter. A reversible control of cerebral activities is critical for bats to accommodate a repeated torpor-arousal cycle during hibernation. Little is known about the molecular mechanism that regulates neuronal ac...

ORGANISM(S): Bos taurus (Bovine) Pan troglodytes (Chimpanzee) Rattus rattus (Black rat) Arabidopsis thaliana (Mouse-ear cress) Mesocricetus auratus (Golden hamster) Homo sapiens (Human) Mus musculus (Mouse) Sus scrofa domesticus (domestic pig) Rattus norvegicus (Rat) Equus caballus (Horse)

2017-05-11 | PXD005158 | Pride

Expression, prognosis value, and immune infiltration of lncRNA ASB16-AS1 identified by pan-cancer analysis.

Not available

S-EPMC8810074 | biostudies-literature

Activation of Akt, Nrf2, and NF-κB signal transduction pathways in the liver as a mechanism of survival for torpid Myotis ricketti Bats

Unfolded protein accumulation in the lumen of endoplasmic reticulum (ER) induced by cold exposure is termed UPRER. Some mammals hibernate to overcome cold winter. We investigated whether hibernating bats are under UPRER and activate Akt, Nrf2, and NF-κB signaling pathways that are critical for cell ...

ORGANISM(S): Myotis ricketti

2020-11-17 | PXD016109 | Pride

Mitochondria Eif2 Akt Hibernation Upr And lc-ms/ms Nf-κb Bats Proteomics Liver

Comprehensive Pan-cancer Analysis Revealed CASP10 As a Promising Biomarker For Diverse Tumor Types.

Not available

S-EPMC11954456 | biostudies-literature

The pan-cancer landscape of abnormal DNA methylation and intratumor microorganisms.

Not available

S-EPMC9958063 | biostudies-literature

Establishment and validation of a plasma oncofetal chondroitin sulfated proteoglycan for pan-cancer detection.

Not available

S-EPMC9902466 | biostudies-literature