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ProteomicsThermal proteome profiling of Escherichia coli mutants
We performed two dimensional thermal proteome profiling (2D-TPP) in Escherichia coli mutants to measure changes in abundance and thermal stability.
ORGANISM(S): Escherichia coli 
2020-09-11 | PXD016589 | Pride
Escherichia coli Genetic perturbation Mutants Thermal proteome profiling 
ProteomicsEffects of gene knockout on Shigella proteome
We measured the impact of multiple genes on the proteome of Shigella.
ORGANISM(S): Shigella flexneri 5b 
2025-03-07 | PXD046629 | Pride
Knockout Shigella 
ProteomicsBacterial proteome under stress conditions
We measured the proteome of multiple species exposed to multiple stresses.
ORGANISM(S): Yersinia pseudotuberculosis Salmonella enterica subsp. enterica serovar Typhimurium Staphylococcus aureus 
2026-09-28 | PXD055243 | Pride
Staphylococcus aureus Salmonella enterica Yersinia pseudotuberculosis Stress 
ProteomicsThermal proteome profiling of caffeine in E. coli
We performed thermal proteome profiling of caffeine in WT and the rob deletion mutant of Escherichia coli.
ORGANISM(S): Escherichia coli 
2025-06-23 | PXD062960 | Pride
Thermal proteome profiling Escherichia coli Rob Tpp Caffeine 
ProteomicsEffects of indole-derivatives on Salmonella proteome
We profiled the impact of indole and methylated derivatives on the proteome of Salmonella.
ORGANISM(S): Salmonella enterica subsp. enterica serovar Typhimurium 
2026-09-01 | PXD079402 | Pride
Salmonella Indole 
ProteomicsFlotillin effects on heat shock in Staphylococcus aureus
We measured the impact of flotillin on the solubility of proteins after heat shock in Staphylococcus aureus, by measuring the effects of a knockout mutant.
ORGANISM(S): Staphylococcus aureus 
2024-06-10 | PXD041057 | Pride
Flotillin Heat shock Staphylococcus aureus Floa 
ProteomicsMacrolide drug interactions in Bacteroidaceae
We profiled the proteome of Phocaeicola vulgatus and Bacteroides uniformis when exposed to dicumarol, benzobromarone and tolfenamic acid (and in combination with erythromin).
ORGANISM(S): Phocaeicola vulgatus Bacteroides uniformis 
2025-11-28 | PXD066285 | Pride
Erythromycin Dicumarol Macrolide Benzbromarone Bacteroides Tolfenamic acid 
ProteomicsProteome profiling of human gut microbiome species grown on spent medium of another species
We profiled the proteome of Mediterraneibacter gnavus grown on the spent medium of Clostridium perfringens, and Veillonella parvula grown on the spent medium of Streptococcus parasanguinis.
ORGANISM(S): Ruminococcus gnavus Clostridium perfringens Streptococcus parasanguinis Veillonella parvula 
2026-07-22 | PXD070029 | Pride
Spent medium Human gut microbiome 
ProteomicsLSD1 knockout effects on proteome
We measured the impact of deleting LSD1 on the proteome of Mus musculus.
ORGANISM(S): Mus musculus (Mouse) 
2024-07-17 | PXD042495 | Pride
Knockout Lsd1 Rescue Mouse 
ProteomicsSecretome of Staphylococcus aureus under drug treatment
We measured the secreted protein fraction of Staphylococcus aureus exposed to drugs.
ORGANISM(S): Staphylococcus aureus 
2026-04-21 | PXD055903 | Pride
Drug Staphylococcus aureus Secretome 
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