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ProteomicsComparative proteomic analysis of hemolymph from uninfected and Candidatus Liberibacter asiaticus-infected Diaphorina citri
Hemolymph was characterized from Diaphorina citri adults infected with the phytopathogen, Candidatus Liberibacter asiaticus (CLas) and compared with that from uninfected psyllids. This study identified 5531 and 3220 peptides within infected and uninfected hemolymph using nano LC-MS/MS. A reduced num...
ORGANISM(S): Diaphorina citri (Asian citrus psyllid) Wolbachia endosymbiont of Diaphorina citri Candidatus Profftella armatura Liberibacter endosymbiont of Diaphorina citri Candidatus Carsonella ruddii DC 
2017-01-18 | PXD005404 | Pride
Asian citrus psyllid Hemolymph Diaphorina citri Endosymbionts Hemiptera 
ProteomicsTowards a universal sample preparation method for denaturing top-down proteomics of complex proteomes
A universal and standardized sample preparation method becomes vital for denaturing top-down proteomics (dTDP) to advance the scale and accuracy of proteoform delineation in complex biological systems. It needs to have high protein recovery, minimum bias, good reproducibility, and compatibility with...
ORGANISM(S): Homo sapiens (Human) Escherichia coli 
2020-05-22 | PXD018248 | Pride
Histone Ptms Membrane ultrafiltration Chloroform-methanol precipitation Membrane proteins Sp3 Denaturing top-down proteomics Cze-ms/ms Sds Sample preparation 
UnknownIdentification and Connectomic Profiling of Concussion Using Bayesian Machine Learning.
Not available
S-EPMC11564847 | biostudies-literature
ProteomicsThe Hidden Culprit of Visceral Fat: Dysfunctional Subcutaneous Adipose Tissue – Serum proteomics
To investigate the proteomic profiles of paired subcutaneous adipose tissue (SAT) and visceral adipose tissue (VAT) samples, as well as their correlations with clinical traits in severely obese patients, and to identify potential serum protein markers associated with tissue expression or metabolic s...
ORGANISM(S): Homo sapiens (Human) 
2024-05-24 | PXD041750 | Pride
Adipose tissue  visceral adipose tissue  subcutaneous adipose tissue  obesity  proteomics  type 2 diabetes  serum proteomics 
UnknownA simple model for predicting the signal for a head-mounted transmission chamber system, allowing IMRT in-vivo dosimetry without pretreatment linac time.
Not available
S-EPMC5875507 | biostudies-literature
Proteomicsp38-MAPK mediated rRNA processing and translation regulation enables PrE differentiation during mouse blastocyst maturation
p38-MAPKs are stress activated kinases necessary for placental development and nutrient and oxygen transfer during murine post-implantation development. In preimplantation development, p38-MAPK activity is required for blastocyst formation. Additionally, we have previously reported its role in regul...
ORGANISM(S): Mus musculus (Mouse) 
2021-06-28 | PXD025711 | Pride
Lc-msms P38-mapk Phosphoproteomics Human 
ProteomicsTobacco pollen tube-secretome following penetration through the pistil
As in animals, cell-cell communication plays pivotal role in male-female recognition during plant sexual reproduction. Prelaid peptides secreted from the female reproductive tissues guide pollen tubes towards ovules for fertilization. However, the elaborate mechanisms for this dialogue have remained...
ORGANISM(S): Nicotiana tabacum (Common tobacco) 
2016-03-18 | PXD002215 | Pride
Lc-msms Cell-cell communication Gel-free Label-free Nicotiana tabacum Pollen tube guidance Secretome 
ProteomicsDDX21 is a p38-MAPK sensitive nucleolar protein necessary for mouse preimplantation embryo development and cell-fate specification
2-cell (E1.5) stage embryos were cultured in normal KSOM+AA conditions until E3.5 +2h and thereafter 100 embryos each were moved to control or p38-MAPKi conditions and cultured for another 7 hours (E3.5 +9h). The embryos were then washed through pre-warmed (37˚C) Hank’s balanced salt solution (HBSS,...
ORGANISM(S): Mus musculus (Mouse) 
2021-07-12 | PXD025754 | Pride
Lc-msms Preimplantation embryo development Ddx21 Cell fate specification P38-mapk 
ProteomicsRoles of the phosphorylated SF3B1 in the activated spliceosome - experiment 2
SF3B1 is essential for assembly of B-complex spliceosome and activation of the Bact complex and undergoes dynamic phosphorylation and dephosphorylation during the splicing cycle. We have recently showed that the N-terminus of SF3B1 is phosphorylated during spliceosome activation by a little studied ...
ORGANISM(S): Homo sapiens (Human) 
2026-02-24 | PXD063162 | Pride
Sf3b1 phosphorylation Snip1 Rna splicing 
ProteomicsRoles of the phosphorylated SF3B1 in the activated spliceosome - experiment 1
SF3B1 is essential for assembly of B-complex spliceosome and activation of the Bact complex and undergoes dynamic phosphorylation and dephosphorylation during the splicing cycle. We have recently showed that the N-terminus of SF3B1 is phosphorylated during spliceosome activation by a little studied ...
ORGANISM(S): Homo sapiens (Human) 
2026-02-24 | PXD063160 | Pride
Sf3b1 phosphorylation Snip1 Rna splicing 
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