Peng G G - OmicsDI

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Unknown (7629)
Proteomics (260)
Transcriptomics (203)
Metabolomics (98)
Genomics (59)
Models (3)
Other (1)

Organisms

Homo sapiens (111)
Mus musculus (80)
Rattus norvegicus (16)
Arabidopsis thaliana (14)
Saccharomyces cerevisiae (9)
Drosophila melanogaster (7)
Oryza sativa (6)
Listeria monocytogenes (5)
Zea mays (4)
Manihot esculenta (3)
Pseudomonas putida (3)
Danio rerio (3)
synthetic construct (2)
Vitis vinifera (2)
Heterocephalus glaber (2)
Caenorhabditis elegans (2)
Gallus gallus (2)
Oryctolagus cuniculus (1)
Acipenser transmontanus (1)
Spalax carmeli (1)
Nannospalax galili (1)
Acromyrmex echinatior (1)
Thiobacillus denitrificans ATCC 25259 (1)
Beauveria bassiana (1)
Trichinella spiralis (1)
Taenia multiceps (1)
Musa acuminata (1)
Cordyceps militaris (1)
Metarhizium acridum (1)
Trichophyton rubrum (1)

Organisms

Mus musculus (5)
Streptococcus mutans (1)
Escherichia coli str. K-12 substr. MG1655 (1)
Rattus norvegicus (1)
Saccharomyces cerevisiae (1)

Repository

biostudies-arrayexpress (220)
pride (180)
MetaboLights (96)
iProX (59)
EGA (30)
MassIVE (16)
ENA (9)
PeptideAtlas (5)
geo (4)
BioModels (3)
GNPS (2)
GPMDB (1)

Tissue

Cell culture (37)
Brain (18)
Epithelial cell (17)
Whole body (13)
Plant cell (7)
Colon (6)
Leaf (6)
Blood serum (5)
Liver (5)
Root (5)
Lung (4)
Bone marrow (3)
Fibroblast (3)
Hepatocyte (3)
Kidney (3)
Permanent cell line cell (3)
Stem cell (3)
T cell (3)
Adipose tissue (2)
Blood cell (2)
Cell suspension culture (2)
Early embryonic cell (2)
Embryo (2)
Heart (2)
Heterotroph (2)
Leukocyte (2)
Seed (2)
Testis (2)
Brain (1)
Prefrontal Cortex (1)

Disease

Disease free (7)
Breast cancer (6)
Alzheimer's disease (3)
Cervix carcinoma (3)
Colon cancer (3)
Brain disease (2)
Disease (2)
Lung adenocarcinoma (2)
Pancreatic carcinoma (2)
Type 2 diabetes mellitus (2)
Heart disease (1)
Normal (1)
Not Available (1)
Alzheimer's Disease (1)
Acute kidney failure (1)
Acute leukemia (1)
Avian influenza (1)
Brain glioblastoma multiforme (1)
COVID-19 (1)
Cutaneous malignant melanoma 1 (1)
Diarrhea (1)
Diffuse gastric cancer (1)
Drug dependence (1)
Duodenal ulcer (1)
Endometrial Endometrioid Adenocarcinoma (1)
Gastric adenocarcinoma (1)
Glioblastoma (1)
Irritable bowel syndrome (1)
Liver disease (1)
Lung cancer (1)

Technology Type

Mass Spectrometry (180)
Shotgun proteomics (108)
Mass spectrometry (76)
Affinity purification coupled with mass spectrometry proteomics (26)
Gel-based experiment (18)
Mass spectrometry assay (15)
Data-dependent acquisition (14)
Bottom-up proteomics (13)
Top-down proteomics (7)
NMR spectroscopy (6)
SWATH MS (6)
Data-independent acquisition (5)
Chemical cross-linking coupled with mass spectrometry proteomics (3)
Illumina HiSeq 2000 (2)
Affinity proteomics (2)
Illumina HiSeq 2000, HiSeq X Ten, Illumina HiSeq 2500, ILLUMINA (1)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
SRM/MRM (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (41)
Illumina NovaSeq 6000 (8)
Generation III Array Scanner [Amersham] (5)
Q Exactive (5)
ScanArray 4000 [PerkinElmer] (3)
LTQ Orbitrap Elite (3)
418 [Affymetrix] (2)
Illumina HiSeq 2500 (2)
Illumina HiSeq 4000 (2)
Agilent 7890A GC coupled to a 5975C inert XL MSD (2)
Q Exactive Plus (2)
TripleTOF 5600 (2)
Hamamatsu Nanozoomer S60 (1)
BGIseq500 (1)
Unix (1)
GenePix Personal 4100A [Axon Instruments] (1)
Scanning hardware (1)
Affymetrix (1)
BGISEQ-500 (1)
Illumina HiSeq 2000 (1)
NextSeq 500 (1)
LTQ FT (1)
MaXis (1)
Instrument (1)
Agilent 7890A GC with 5975C inert XL MSD (1)
Exactive Plus (1)
Orbitrap Fusion Lumos (1)
Q Exactive HF (1)
Thermo Scientific Q-Exactive Plus (1)
TimsTOF Pro 2 (1)

Publication Date

2023 (48)
2022 (46)
2025 (44)
2021 (44)
2024 (41)
2013 (35)
2014 (34)
2012 (28)
2026 (27)
2015 (27)
2020 (27)
2010 (22)
2017 (20)
2008 (20)
2011 (18)
2016 (17)
2018 (17)
2019 (16)
2009 (10)
2007 (5)
2005 (3)
2006 (3)
2004 (2)
2003 (1)

UNIPROT ID/AC

A0A024RC46 (2)
A0A087WTX5 (2)
A0A087WWK8 (2)
A0A087WYL9 (2)
A0A087X130 (2)
A0A087X1V9 (2)
A0A0A0MR66 (2)
A0A0A0MS07 (2)
A0A0A0MS51 (2)
A0A0C4DGT3 (2)
A0FGR8 (2)
A0FGR8-2 (2)
A0FGR8-6 (2)
A0MZ66 (2)
A5A3E0 (2)
A5PKW4 (2)
A6NHL2 (2)
A6NL88 (2)
A6NNZ2 (2)
A8MTJ3 (2)
A8MVW0 (2)
A9CQZ4 (2)
B1AK88 (2)
B1AKZ5 (2)
B2RXF3 (2)
Q08828 (1)
P63092 (1)
P54750 (1)
Q5T5Y4 (1)
P17612 (1)

ENSEMBL ID

ENSG00000170477 (1)
ENSG00000229353 (1)

CHEBI ID

CHEBI:15891 (19)
CHEBI:16704 (19)
CHEBI:15354 (19)
CHEBI:30769 (19)
CHEBI:16335 (18)
CHEBI:17750 (18)
CHEBI:17368 (18)
CHEBI:16811 (17)
CHEBI:16708 (17)
CHEBI:28300 (16)
CHEBI:18257 (16)
CHEBI:16737 (16)
CHEBI:27897 (16)
CHEBI:17895 (16)
CHEBI:17596 (16)
CHEBI:25094 (15)
CHEBI:16235 (15)
CHEBI:16919 (15)
CHEBI:17351 (15)
CHEBI:17822 (14)
CHEBI:18237 (14)
CHEBI:16750 (14)
CHEBI:28044 (14)
CHEBI:17154 (14)
CHEBI:16196 (14)
CHEBI:17509 (14)
CHEBI:17489 (1)
CHEBI:15996 (1)
CHEBI:17552 (1)
CHEBI:15422 (1)

Metabolite Name

Adenine (14)
Hypoxanthine (14)
Guanine (13)
Uridine (13)
Glycine (11)
Adenosine (11)
Creatinine (11)
Ornithine (10)
Choline (10)
Citric acid (10)
Creatine (10)
Epinephrine (9)
Valine (9)
Betaine (9)
Pantothenic acid (9)
Taurine (9)
Histamine (9)
Proline (9)
Uric acid (9)
Thymidine (9)
Inosine (9)
Uracil (8)
Genistein (8)
Kynurenic acid (8)
L-Histidine (8)
Fumaric acid (8)
Xanthosine (8)
Taurocholic acid (8)
Cytosine (8)
Riboflavin (8)

First Public Date

2014 (5)
2022 (2)
2026 (1)
2013 (1)

Modelling Approach

Ordinary differential equation model (3)

Lab affiliation

The University of Sydney (3)
Alkali Soil Natural Environmental Science Center, Northeast Forestry University, Key Laboratory of Saline-alkali Vegetation Ecology Restoration in Oil Field, Ministry of Education, Harbin 150040, China (2)
Brain Injury Center, Renji Hospital, School of Medicine, Shanghai Jiao Tong University; Shanghai Institute of Head Trauma, Shanghai, China, 200127. (2)
Clinical Reaseach center for Reproduction and Genetics in Hunan Province, Reproductive and Genetic Hospital of CITIC-XIANGYA, Changsha, Hunan, China (2)
Dalian Institute of Chemical Physics, Chinese Academy of Sciences (2)
Department of Structural Biology and Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA (2)
Jiangsu Key Laboratory of Crop Genetics and Physiology/Co-Innovation Center for Modern Production Technology of Grain Crops, Key Laboratory of Plant Functional Genomics of the Ministry of Education, Yangzhou University, Yangzhou 225009, China (2)
School of Biological Sciences, Victoria University of Wellington, Wellington, New Zealand (2)
Shanghaitech University (2)
St Jude Children's Research Hospital (2)
St. Jude Children's Research Hospital (2)
St. Jude Children’s Research Hospital (2)
State Key Laboratory of Oncology in South China, Collaborative Innovation Center for Cancer Medicine, Guangdong Key Laboratory of Nasopharyngeal Carcinoma Diagnosis and Therapy, Sun Yat-sen University Cancer Center, Guangzhou 510060, China (2)
The Jenner Institute Nuffield Department of Medicine University of Oxford (2)
Toxicology Centre, University of Saskatchewan (2)
Utrecht University (2)
Westerdijk Fungal Biodiversity Institute (2)
1 Shanghai Key Laboratory of Tuberculosis, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai 200433, PR China 2 Department of Microbiology and Immunology, Tongji University School of Medicine, Shanghai 200049, PR China 3 Clinical Translation Research Center, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai 200433, China. (1)
13998905918 (1)
1Peking-Tsinghua Center for Life Sciences, Peking University, Beijing 100871, China 2Academy of Advanced Interdisciplinary Studies, Peking University, Beijing 100871, China 3Synthetic and Functional Biomolecules Center, Beijing National Laboratory for Molecular Sciences, Key Laboratory of Bioorganic Chemistry and Molecular Engineering of Ministry of Education, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China (1)
Aberystwyth University (1)
Acupuncture-moxibustion and Orthopedic College, Hubei University of Chinese Medicine, Wuhan, China (1)
Agriculture and Agri Food Canada (1)
Analytical Research Center for Organic and Biological Molecules, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, 555 Zu Chong Zhi Road, Shanghai 201203, China (1)
Associate Member Developmental Neurobiology St. Jude Children's Research Hospital (1)
Bengbu medical college (1)
CAS Key Laboratory for Quantitative Engineering Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences (1)
Center for Proteomics and Department of Nutrition, School of Medicine, Case Western Reserve University, Cleveland, OH (1)
Centre de Recherche en Cancérologie de Marseille, CRCM INSERM U1068 - Equipe de J.L. Iovanna 163 avenue de Luminy, Parc scientifique de Luminy, Case 915 13288 Marseille Cedex 9 FRANCE Tel : (+33) 4 91 82 88 31 (1)
Chair of Proteomics and Bioanalytics, Technical University of Munich (1)

IsPrivate

False (3)

Classification

bacteria (2)

Modification

2x(15)N labeled L-lysine (1)
4x(15)N labeled L-arginine (1)

Study type

Transcription profiling by array (122)
RNA-seq of coding RNA (41)
ChIP-seq (17)
RNA-seq of non coding RNA (9)
RNA-seq of coding RNA from single cells (7)
ChIP-chip by tiling array (6)
Comparative genomic hybridization by array (5)
Other (4)
Unknown experiment type (3)
Methylation profiling by high throughput sequencing (3)
Cell line - High-throughput sequencing (1)
Methylation profiling by array (1)

Release Date

2022 (1088)
2025 (1080)
2023 (951)
2024 (860)
2021 (823)
2020 (591)
2019 (461)
2018 (388)
2017 (306)
2016 (244)
2015 (238)
2014 (192)
2026 (134)
2013 (130)
2012 (113)
2011 (65)
2010 (64)
2009 (43)
2008 (38)
2007 (18)
2006 (9)
2005 (4)
2004 (3)
2003 (3)
2001 (2)
2000 (1)

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Glycolytic Enzyme Coalesce in G bodies Under Hypoxic Stress

Glycolysis is upregulated in cells under specific conditions, such as hypoxia and high energy demand, to achieve the metabolic requirements for continued cell proliferation. However, the mechanism of this increased glycolytic rate remains poorly understood. In the budding yeast Saccharomyces cerevis...

ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast)

2017-07-24 | PXD006686 | Pride

Pericapsular nervegroup (PENG) block—a scoping review

Not available

S-EPMC8919174 | biostudies-literature

Whole gene expression data from osteocyte-like cell line MLO-Y4 under large gradient high magnetic field (LG-HMF)

osteocyte is the mechanosensor in bone, taking up pivotal position in mediating the mechano-induced bone remodeling. Dimagnetic levitation has been used to stimulating a reduced gravity environment for studing the effects of changed gravity to different organisms.we constructed a superconducting mag...

ORGANISM(S): Mus musculus

2015-02-02 | E-GEOD-62128 | biostudies-arrayexpress

Metabolomic signatures discriminate horses with clinical signs of atypical myopathy from healthy co-grazing horses

Atypical myopathy (AM) is a severe rhabdomyolysis syndrome that occurs in grazing horses. Despite the presence of toxins in their blood, all horses from the same pasture are not prone to display clinical signs of AM. The objective of this study was to compare the blood metabolomic profiles of horses...

2021-08-31 | MTBLS2579 | MetaboLights

Covalent penicillin-protein conjugates elicit anti-drug antibodies that are clonally and functionally restricted

Many archetypal and emerging classes of small-molecule therapeutics form covalent 38 protein adducts. In vivo, both the resulting conjugates and their off-target side conjugates have the potential to elicit antibodies, with implications for allergy and drug sequestration. Although β-lactam antibioti...

ORGANISM(S): Homo sapiens (Human) Gallus gallus (Chicken)

2024-08-08 | PXD052026 | Pride

B-lactam Proteomics

Hydrophobic Adsorption Followed by Desorption with Ethanol-Water for Recovery of Penicillin G from Fermentation Broth.

Not available

S-EPMC7144136 | biostudies-literature

Neural embryonic stem cell (ESTn) test dose-responses of six compounds.

Effects of six compounds on stem cell neural development.

ORGANISM(S): Mus musculus

2012-11-08 | E-TABM-1216 | biostudies-arrayexpress

A Novel G Protein-Biased and Subtype-Selective Agonist for a G Protein-Coupled Receptor Discovered from Screening Herbal Extracts.

Not available