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ProteomicsPerformance evaluation of the Q Exactive HF-X for shotgun proteomics
Performance evaluation of the Q Exactive HF-X for shotgun proteomics
ORGANISM(S): Homo sapiens (Human) 
2017-11-30 | PXD006932 | Pride
Q exactive hf-x bottom-up shotgun proteomics q exactive dia dda 
MetabolomicsX-ray Irradiation Suppresses Keloid Growth by Inducing G2/M Arrest via the Phytosphingosine-KIF20A Axis
Keloid radiotherapy is clinically effective but has an incomplete underlying molecular mechanism and limited accessibility; we used X-ray exposure to identify effector pathways replicating its antifibrotic benefits without further radiation. After collecting patient keloid samples, primary human kel...
2026-06-06 | MTBLS14461 | MetaboLights
ProteomicsHuman_Testis_QE-HF - Deep Coverage Proteomics Identifies More Low-Abundance Missing Proteins in Human Testis Tissue with Q-Exactive HF Mass Spectrometer
The Chromosome-Centric Human Proteome Project (C-HPP) aims at finding existence evidence of missing proteins (MPs) at the early stage. Based on previous research, it has been proved that human testis tissue is suitable for further research of MPs because of its high gene expression level and high tr...
ORGANISM(S): Homo sapiens (Human) 
2016-09-30 | PXD004092 | Pride
Human Qe-hf Testis 
ProteomicsHuman_Testis_QE-HF
The Chromosome-Centric Human Proteome Project (C-HPP) aims at finding existence evidence of missing proteins (MPs) at the early stage. Based on previous research, it has been proved that human testis tissue is suitable for further research of MPs because of its high gene expression level and high tr...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2019-06-17 | MSV000083983 | MassIVE
MetabolomicsUntargeted liver metabolomic profiling of hepatocyte-specific Serpine2-knockout mice following ischemia-reperfusion injury
Untargeted metabolomics was performed to investigate hepatic metabolic changes associated with hepatocyte-specific Serpine2 deletion after ischemia-reperfusion injury. Eight liver samples were collected from Serpine2-floxed control mice (NC) and hepatocyte-specific Serpine2-knockout mice (HKO), with...
2026-10-11 | MTBLS15998 | MetaboLights
ProteomicsLabel-free quantitative proteomics of Drosophila melanogaster cells across different time points
This project involves a label-free quantitative proteomics analysis of Drosophila melanogaster using Data Independent Acquisition (DIA) mode on a Q-Exactive HF X mass spectrometer. The study includes 36 samples derived from glia cells (G) , S2 cells (S) and muscle cells (m).
ORGANISM(S): Drosophila melanogaster (Fruit fly) 
2026-10-23 | PXD081430 | Pride
Dia Swath Q-exactive hf x Label-free quantification Drosophila melanogaster Glia 
MetabolomicsTargeted rewiring of the rhizosphere metabolite-microbe axis restores phosphorus acquisition in inefficient citrus rootstocks
This study aimed to screen citrus rootstocks with contrasting phosphorus (P) efficiency. Seedlings were grown in P-deficient red soil-vermiculite substrate under greenhouse conditions. After 5 months cultivation, plant biomass, leaf P concentration, root architecture, rhizosphere available P and pho...
2026-10-22 | MTBLS15885 | MetaboLights
MetabolomicsUntargeted LC-MS metabolomics of in vitro cultured Rothia mucilaginosa supernatant and pellet samples
This study reports untargeted LC-MS metabolomics data from in vitro culture of Rothia mucilaginosa (BNCC363031). A total of 13 biological samples were analyzed, including culture supernatant samples (S1-S5), bacterial pellet samples (B1-B5), and uninoculated medium controls (M1-M3). Data were acquir...
2026-10-06 | MTBLS14792 | MetaboLights
ProteomicsIdentification of PPARα-associated proteins in mouse macrophages by immunoprecipitation coupled with Q Exactive LC-MS/MS
This PRIDE project contains raw and processed LC-MS/MS data generated from immunoprecipitation–mass spectrometry (IP-MS) experiments designed to identify PPARα-associated proteins in mouse bone marrow-derived macrophages (BMDMs). In this study, His-tagged PPARα was overexpressed in BMDMs and immunop...
ORGANISM(S): Mus musculus (Mouse) 
2026-09-09 | PXD077311 | Pride
Pparα  mus musculus  bone marrow-derived macrophages  affinity purification-mass spectrometry  immunoprecipitation 
MetabolomicsRole and Mechanism of SERPINA1/PLG/TGFB1-Induced Adipose Fibroblast Activation in Dorsal Cervical Adipose Accumulation
This untargeted metabolomics study investigates metabolic differences in human adipose tissue between Group A (n=7) and Group B (n=7). Samples were analyzed using LC-MS/MS in both positive and negative ion modes on a Thermo Q-Exactive HF-X mass spectrometer. A total of 2,305 metabolites were detecte...
2026-05-08 | MTBLS14456 | MetaboLights
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