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ProteomicsRNA pull down experiment for vA-202 (ANAPC1P2) lncRNA
This study aimed to identify protein interaction partners of the lncRNA vA-202 using an RNA pull-down approach followed by mass spectrometry. Biotinylated vA-202 RNA was generated by in vitro transcription incorporating biotin-14-CTP. For each pull-down reaction, 400 µg of whole-cell lysate (in a to...
ORGANISM(S): Homo sapiens (Human) 
2026-05-25 | PXD070150 | Pride
Human Rna pull down Orbutrap ms 
Genomicsmir-154 in mouse lung development - pull-down RNA
mir-154 in mouse lung development - pull-down RNA
PRJNA593006 | ENA
ProteomicsProteomic identification of primate-specific lncRNA LINC01021 interactors via RNA pull-down MS
Long non-coding RNAs (lncRNAs) play critical regulatory roles in primate-specific biological processes, yet many primate-specific lncRNAs and their protein interactors remain poorly characterized. In this study, we focused on primate-specific lncRNAs as potential drivers of protein interactions. Usi...
ORGANISM(S): Homo sapiens (Human) 
2026-06-29 | PXD075354 | Pride
Long non-coding rna Proteomics Lncrna Mass spectrometry Protein-rna interaction Linc01021 Primate-specific lncrna Rna-binding protein Interactome Rbms Rna pull-down 
ProteomicsHaCaT ACSL4mRNA probe pull-down MS
ACSL4mRNA probe was designed for pull-down experiments in HaCaT lysates
ORGANISM(S): Homo sapiens (Human) 
2025-10-13 | PXD052755 | Pride
Hacat acsl4mrna pull-down ms 
GenomicsRNA pull down assay of GST-ZFP36L1 (wildtype and mutant)
RNA pull down assay of GST-ZFP36L1 (wildtype and mutant)
PRJNA561512 | ENA
ProteomicsMouse hippocampus RNA pull down LC-MS/MS
Antisense and sense probes of noncoding RNA GAS5 were used to perform the RNA pull down experiment on mouse hippocampus tissues. Then the proteins were identified by LC-MS/MS.
ORGANISM(S): Mus musculus (Mouse) 
2021-09-09 | PXD023363 | Pride
Mouse hippocampus Rna pull down Lc-ms/ms 
ProteomicsRNA-Pull down and MS for Snhg3
To screen Snhg3-binding proteins using-RNA Pull down and MS
ORGANISM(S): Mus Musculus 
2023-01-17 | PXD039526 |
TranscriptomicsTcRBP40 pull-down ribonomics
RNA pull-down assay.
For the recombinant protein pull-down assays, 50 M-5g of recombinant His-tag TcRBP40 protein were bound to 100 uL of Ni-NTA resin (Qiagen) overnight at 4M-0C. 100 M-5g of total RNA from epimastigotes were incubated with the bound protein in 500 M-5l EMSA buffer at 4M-0C for 2...
ORGANISM(S): Trypanosoma cruzi 
2012-06-30 | E-MEXP-3057 | biostudies-arrayexpress
ProteomicsLETR1 (LINC01197) RNA pull-down in human LECs followed by LC-MSMS
Recent studies have revealed the importance of long noncoding RNAs (lncRNAs) as tissue-specific regulators of gene expression. There is ample evidence that distinct types of vasculature undergo tight transcriptional control to preserve their structure, identity, and functions. We determined, for the...
ORGANISM(S): Homo sapiens (Human) 
2020-12-21 | PXD018578 | Pride
Human Lesr2 Lc-msms Linc01197 Lncrna Lecs 
ProteomicsAnalysis of circ101093 binding proteins in A549 cells after RNA pull-down.
We used circular RNA 101093 and its antisense to perform RNA pull-down, and analyzed the peptides in blank group, antisense group and circular RNA 101093 group. The object of this group is to analyze circ101093-binding protein. Blank and antisense group are used as negative control group.
ORGANISM(S): Homo sapiens (Human) 
2022-05-20 | PXD025575 | Pride
Cancer Circular rna Fabp3 Luad Rna pull-down 
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