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ProteomicsInference and quantification of peptidoforms in large sample cohorts by SWATH-MS: 14-3-3 data set
This data set represent an experiment assessing protein-protein interaction dynamics of the 14-3-3 with a focus on phosphorylation.
ORGANISM(S): Homo sapiens (Human) 
2017-06-12 | PXD006057 | Pride
14-3-3 Ap-ms Phosphopeptides Ipf Ap-swath Openswath Human Kinase Benchmark 
ProteomicsInference and quantification of peptidoforms in large sample cohorts by SWATH-MS: PTM-SWATH-MS Gold Standard data set
The PTM-SWATH MS Gold Standard data set consists of a previously published (Soste et al., 2014, PMID:25194849) set of 579 unpurified, synthetic, heavy-isotope labeled phosphopeptides (Thermo Scientific Biopolymers). These phosphopeptides represent biologically relevant sequences from S. cerevisiae p...
ORGANISM(S): Homo sapiens (Human) Saccharomyces cerevisiae (Baker's yeast) 
2017-06-12 | PXD004573 | Pride
Ipf Openswath Synthetic phosphopeptides Gold standard data set Human Yeast 
ProteomicsInference and quantification of peptidoforms in large sample cohorts by SWATH-MS: Phosphopeptide-enriched data set
This data set represent an experiment comparing enriched phosphopeptides of a human U2OS cell line. Phosphopeptide-enriched samples of ten nocodazole treated and ten control U2OS cell line samples were acquired each in DDA and DIA (SWATH-MS) modes.
ORGANISM(S): Homo sapiens (Human) 
2017-06-12 | PXD006056 | Pride
Phosphopeptides Ipf Openswath Benchmark Human 
ProteomicsThe Pan-Human Library: A repository of assays to quantify 10 000 proteins by SWATH-MS / SWATH-MS validation data
The “Pan-Human Library” is a compendium of highly specific assays covering more than 10 000 human proteins and enabling their targeted analysis in SWATH-MS datasets acquired from research or clinical specimens. This dataset contains validation SWATH-MS data and OpenSWATH results of whole cell lysate...
ORGANISM(S): Homo sapiens (Human) 
2014-08-08 | PXD000954 | Pride
Human Openswath Swath Swath-ms Targeted proteomics Pan-human library 
ProteomicsThe Pan-Human Library: A repository of assays to quantify 10 000 proteins by SWATH-MS
The “Pan-Human Library” is a compendium of highly specific assays covering more than 10 000 human proteins and enabling their targeted analysis in SWATH-MS datasets acquired from research or clinical specimens.
ORGANISM(S): Homo sapiens (Human) 
2014-08-08 | PXD000953 | Pride
Pan-human library Openswath Transition list Phl Swath-ms Targeted proteomics Assay 
ProteomicsInference and quantification of peptidoforms in large sample cohorts by SWATH-MS: Twin blood plasma quantitative variance components
This data set represents a reanalysis of human blood plasma samples measured by SWATH-MS of 36 pairs of monozygotic and 22 pairs of dizygotic twins that were sampled at two longitudinal time points (Liu et al., 2015, PMID:25652787). The data were used to determine the overall quantitative variabilit...
ORGANISM(S): Homo sapiens (Human) 
2017-06-06 | PXD004574 | Pride
Ipf Openswath Blood plasma Ptm Human 
UnknownAn Experimental Study of the Effects of Patient Race, Sexual Orientation, and Injection Drug Use on Providers' PrEP-Related Clinical Judgments.
Not available
S-EPMC9434708 | biostudies-literature
UnknownComplex assembly and activity states as multifaceted protein attributes explaining phenotypic variability.
Not available
S-EPMC13639060 | biostudies-literature
ProteomicsSWATH analysis of 1433B_HUMAN affinity purifications from HEK293 cells after time course treatment with IGF1
Protein complexes and protein interaction networks are essential mediators of most biological functions. Complexes supporting transient functions such as signal transduction processes are frequently subject to dynamic remodeling. Currently, the majority of studies into the composition of protein com...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2018-08-20 | MSV000082833 | MassIVE
UnknownSociodemographic disparities in corticolimbic structures.
Not available
S-EPMC6508895 | biostudies-literature
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