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TranscriptomicsExpression profiling in Macaca fascicularis liver samples
The long-tailed macaque, also referred to as cynomolgus monkey (Macaca fascicularis), is one of the most important non-human primate animal models in basic and applied biomedical research. To improve the predictive power of primate experiments for humans, we determined the genome sequence of a Macac...
ORGANISM(S): Macaca fascicularis 
2011-08-24 | E-GEOD-30184 | biostudies-arrayexpress
TranscriptomicsHigh-resolution, genome-wide analysis of human metastatic neuroblastoma samples by array-Comparative Genomic Hybridization (aCGH)
Less than 30% of children with high-risk (HR) metastatic neuroblastoma (NB) show a long survival (Pearson 2000). In order to identify novel molecular prognostic markers useful to better predict patientsM-bM-^@M-^Y relapse risk estimation, we performed genome- and/or transcriptome-wide analyses of 12...
ORGANISM(S): Homo sapiens 
2012-10-05 | E-GEOD-35953 | biostudies-arrayexpress
MetabolomicsAtlas of one-carbon metabolism in conventional and germ-free mice reveals folate as a key determinant of biochemical pathways

Folates participate in the one-carbon metabolism (OCM) cycle, supporting many biochemical pathways. Existing methods to profile folate are limited in the diversity of vitamers they measure and the samples they profile. We present a metabolomics workflow for stable extraction, separation, and meas...

2026-02-10 | MTBLS13484 | MetaboLights
TranscriptomicsExpression analysis of shoots in Olea europaea cultivar M-bM-^@M-^XArbequinaM-bM-^@M-^Y collected at different growth time
Genetic changes involved in the juvenile-to-adult transition in the shoot apex of Olea europaea L. occurs years before the first flowering. For the study of the genetic-expression pattern over development, 21 seedlings originating from open pollination of olive cultivar M-bM-^@M-^XArbequinaM-bM-^@M-...
ORGANISM(S): Olea europaea 
2013-11-09 | E-GEOD-52213 | biostudies-arrayexpress
ProteomicsN-linked glycosylation of the M-protein variable region: Glycoproteogenomics reveals a new layer of personalized complexity in multiple myeloma.
Multiple Myeloma (MM) is a plasma cell malignancy characterized by a monoclonal expansion of plasma cells that secrete a characteristic M-protein. This M-protein is crucial for diagnosis and monitoring of MM in the blood of patients. Recent evidence has emerged that N-glycosylation of the M-protein ...
ORGANISM(S): Homo sapiens (Human) 
2023-06-09 | PXD040718 | Pride
Glycoproteomics Glycoproteogenomics M-protein Multiple myeloma 
TranscriptomicsCirculating miRNA microarray analysis from archival plasma samples
Using a microarray-based method we report on: i) adequate intra- and interarray reproducibility of miRNA profiling; ii) feasibility of using archival plasma samples stored for an extended period of time and available in limited amounts; and iii) good correlation between different batches. A total of...
ORGANISM(S): Homo sapiens 
2013-04-23 | E-GEOD-42654 | biostudies-arrayexpress
TranscriptomicsIdentification of novel copy number alterations by high-resolution aCGH from FFPE cutaneous melanoma samples
We investigated a cohort of 34 archival cutaneous melanoma samples by Agilent 40 kb-resolution CGH array. We found a non-random distribution of precise CNAs predictive for clinical outcome. Although most of the alterations defined in this study have been already reported, we mapped novel melanoma-s...
ORGANISM(S): Homo sapiens 
2013-07-01 | E-GEOD-45354 | biostudies-arrayexpress
ProteomicsThe M-phase regulatory phosphatase PP2A-B55δ opposes protein kinase A on Arpp19 to initiate meiotic division
Oocytes are held in meiotic prophase for prolonged periods until hormonal signals trigger meiotic divisions. Key players of M-phase entry are the opposing Cdk1 kinase and PP2AB55δ phosphatase. In Xenopus, the protein Arpp19, phosphorylated at serine 67 by Greatwall, plays an essential role in inhibi...
ORGANISM(S): Xenopus laevis (African clawed frog) 
2021-03-12 | PXD022739 | Pride
M-phase Meiotic Xenopus Oocyte Pp2a Phosphatase Phosphorylation B55 Arpp19 
UnknownQuantitative Analysis and Structural Elucidation of Fatty Acids by Isobaric Multiplex Labeling Reagents for Carbonyl-Containing Compound (SUGAR) Tags and m-CPBA Epoxidation.
Not available
S-EPMC9912774 | biostudies-literature
TranscriptomicsCancer Samples vs. Matched Adjacent Noncancerous Samples
This SuperSeries is composed of the following subset Series: GSE33335: Expression data from gastric tissues: Cancer Samples vs. Matched Adjacent Noncancerous Samples GSE33428: Copy number variation profiling of gastric tissues: Cancer Samples vs. Matched Adjacent Noncancerous Samples Refer to indivi...
ORGANISM(S): Homo sapiens 
2012-05-22 | E-GEOD-33429 | biostudies-arrayexpress
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