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Proteomicsubiquitylome analyses of virus-infected maize
Impacts of virus infections on the ubiquitylome level in maize.
ORGANISM(S): Zea mays (Maize) 
2025-09-08 | PXD054971 | Pride
Scmv Mln Maize Mcmv Ubiquitylome 
UnknownProteome and Ubiquitylome Analyses of Maize Endoplasmic Reticulum under Heat Stress.
Not available
S-EPMC10047965 | biostudies-literature
UnknownWorkflow enabling deepscale immunopeptidome, proteome, ubiquitylome, phosphoproteome, and acetylome analyses of sample-limited tissues.
Not available
S-EPMC10070353 | biostudies-literature
ProteomicsProteome and Ubiquitylome Analyses of Maize Endoplasmic Reticulum Under Heat Stress
High temperatures severely affect plant growth and pose a threat to global crop production. Heat causes the accumulation of misfolded proteins in the ER, and triggers the heat shock response (HSR) in the cytosol and the unfolded protein response (UPR) in the ER. Excessive misfolded proteins undergo ...
ORGANISM(S): Zea Mays 
2023-07-24 | PXD044013 |
Proteomicsusp11 overexpression in neuron derived from mESCs for proteome and ubiquitylome analyses
Using unbiased mass spectrometry-based screen to identify differences in ubiquitinated proteins in the overexpression of Usp11. To focus on potential substrates relevant for Usp11’s role in neurogenesis, we performed experiments with mouse embryonic stem (ES) cells, in which NPC and neurons are deri...
ORGANISM(S): Mus musculus (Mouse) 
2021-01-29 | PXD021189 | Pride
Mescs Ubiquitylome analyses Usp11 
UnknownMass Spectral Feature Analysis of Ubiquitylated Peptides Provides Insights into Probing the Dark Ubiquitylome.
Not available
S-EPMC11623170 | biostudies-literature
ProteomicsEnhanced STEAP4 ubiquitination in Obesity: Insights from Integrated Proteome and Ubiquitylome Analysis of Visceral Adipose Tissue
We obtained the global proteomic and ubiquitylomic data of epididymal VAT from lean and obese male mice by mass spectrometry. Our proteomic analyses revealed significant changes of metabolic pathways involved in fatty acid, acyl-CoA and branched chain amino acids metabolism in obese VAT. Intriguingl...
ORGANISM(S): Mus musculus (Mouse) 
2026-01-23 | PXD060435 | Pride
Ubiquitylome Obesity Steap4 Proteome 
ProteomicsWorkflow enabling deepscale immunopeptidome, proteome, ubiquitylome, phosphoproteome, and acetylome analyses of sample-limited tissues
Abelin JG, Bergstrom EJ, Taylor HB, Rivera KD, Klaeger S, Xu C, Verzani EK, White CJ, WoldemichaelHB, Virshup M, Olive ME, Maynard M, Vartany S, Allen JD, Phulphagar KM, Kane MH, Rachimi S, Mani DR, Gillette MA, Satpathy S, Clauser KR, Udeshi ND, and Carr SA. 2022. Serial multiomic analyses of prote...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) Mus Musculus (ncbitaxon:10090) 
MSV000090437 | MassIVE
Genomics
Proteomes and Ubiquitylome Analyses of Maize Endoplasmic Reticulum Under Heat Stress
PRJNA922509 | ENA
ProteomicsA novel USP30 inhibitor recapitulates genetic loss of USP30 and sets the trigger for PINK1-PARKIN amplification of mitochondrial ubiquitylation.
The mitochondrial deubiquitylase USP30 negatively regulates the selective autophagy of damaged mitochondria. It has been proposed as an actionable target to alleviate the loss of function of the mitophagy pathway governed by the Parkinson’s Disease associated genes PINK1 and PRKN. We present the cha...
ORGANISM(S): Homo sapiens (Human) 
2020-07-03 | PXD018640 | Pride
Ubiquitylome Mitophagy Lc-ms Deubiquitylase Usp30 Parkinson’s disease Dub inhibitor Ubiquitin 
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