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UnknownQuantitative ubiquitylomics reveals the ubiquitination regulation landscape in oral adenoid cystic carcinoma.
Not available
S-EPMC8385350 | biostudies-literature
UnknownMass Spectral Feature Analysis of Ubiquitylated Peptides Provides Insights into Probing the Dark Ubiquitylome.
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S-EPMC11623170 | biostudies-literature
ProteomicsNext-Generation Multiplexed Targeted Proteomics Quantifies Post-Translational Modifications, Compound-Protein Interactions, and Disease Biomarkers with High Throughput
The GoDig platform enables sensitive, multiplexed targeted pathway proteomics without manual scheduling or synthetic standards. Here we present GoDig 2.0, which increases sample multiplexing to 35-fold, improves time efficiency and reduces scan delays for higher success rates, and allows flexible sp...
ORGANISM(S): Homo sapiens (Human) 
2026-06-25 | PXD065227 | Pride
Abpp Sample multiplexing Ptms Targeted proteomics Tmt Ubiquitylomics Reactive cysteines Phosphoproteomics Godig 
UnknownThe Analysis of the Ubiquitylomic Responses to Streptococcus agalactiae Infection in Bovine Mammary Gland Epithelial Cells.
Not available
S-EPMC9342659 | biostudies-literature
ProteomicsMulti-Omics Integration Highlights the Role of Ubiquitination in Endometriosis Fibrosis
In this study, we comprehensively profiled the ubiquitination landscape of endometriosis for the first time. Through proteomics, transcriptomics, and ubiquitylomics analyses of endometrial tissues from two patient cohorts, we uncovered significant dysregulation of ubiquitin-related enzymes and ubiqu...
ORGANISM(S): Homo Sapiens 
PXD036497 |
ProteomicsUbiquitylation by the GID/CTLH complex regulates the metabolic and innate immune response of macrophages to infection by Mycobacterium tuberculosis
The GID/CTLH E3 ligase complex is implicated in several biological processes, yet its full substrate repertoire remains poorly defined. We recently identified the complex as a broad modulator of macrophage responses to Mycobacterium tuberculosis (Mtb) infection. Here, we use label-free proteomics a...
ORGANISM(S): Mus musculus (Mouse) 
2026-06-24 | PXD075792 | Pride
Metabolism Innate immunity Ubiquitylation Tuberculosis Gid/ctlh complex Macrophages 
ProteomicsEffect of heat-shock on total and poly-ubiquitylated proteomes of human A549 lung adeno-carcinoma cells in different proliferation states
Cellular stress responses are crucial for survival in sub-optimal conditions, and almost invar-iably involve proteome-wide alterations at the levels of protein abundance and post-translational modification with poly-ubiquitin chains (poly-ubiquitylation). However, most of our understanding of human ...
ORGANISM(S): Homo sapiens (Human) 
2025-10-08 | PXD067153 | Pride
Human Lc-msms Proteostasis Insoluble Lung Stress Cancer Senescence Heat-shock Epithelia Ubiquitin Aggregate 
ProteomicsEffect of proteasome inhibition on total and poly-ubiquitylated proteomes of human A549 lung adenocarcinoma cells in different proliferation states
Cellular stress responses are crucial for survival in sub-optimal conditions, and almost invar-iably involve proteome-wide alterations at the levels of protein abundance and post-translational modification with poly-ubiquitin chains (poly-ubiquitylation). However, most of our understanding of human ...
ORGANISM(S): Homo sapiens (Human) 
2025-10-08 | PXD067220 | Pride
Human Proteostasis Insoluble Lung Cancer Ubiquitin Aggregate Lc-msms Bortezomib Stress Senescence Epithelia Pro-teasome 
ProteomicsEffect of heat-shock on total, poly-ubiquitylated, and insoluble proteomes of human IMR-90 fibroblasts in different proliferation states
Cellular stress responses are crucial for survival in sub-optimal conditions, and almost invar-iably involve proteome-wide alterations at the levels of protein abundance, post-translational modification with poly-ubiquitin chains (poly-ubiquitylation), and solubility. However, most of our understand...
ORGANISM(S): Homo sapiens (Human) 
2025-10-08 | PXD067225 | Pride
Human Lc-msms Proteostasis Quiescence Insoluble Lung Stress Senescence Heat-shock Fibroblast Ubiquitin Aggregate 
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