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To decipher the mechanisms by which RavH modulates F-actin structures, we performed an affinity purification based SILAC (Stable Isotope Labeling with Amino Acids in Cell Culture) coupled mass spectrometry (MS)toidentify RavH-associated proteins. Cells expressing GFP-RavH or GFP alone were subjected...
ORGANISM(S): Homo sapiens (Human) 
2026-08-14 | PXD082146 | Pride
In this project, RNF6-interacting proteins were precipitated and purified by an anti-body purification strategy followed by HPLC-coupled tandem mass spectrometry (LC/MS/MS).
ORGANISM(S): Homo Sapiens 
2022-04-06 | PXD032990 |
Excessive renal fibrosis is a common pathology in progressive chronic kidney diseases. Inflammatory injury and aberrant repair processes contribute to the development of kidney fibrosis. Myeloid cells, particularly monocytes/macrophages, play a crucial role in kidney fibrosis by releasing their proi...
2024-03-12 | MTBLS8278 | MetaboLights
In current study, we have established a combined strategy using proximity labeling and genetic screening to identify the cellular ligands of Siglec-9. Our use of proximity labeling using APEX2 fusion proteins followed by quantitative proteomics allowed us to efficiently label and enrich cell surface...
ORGANISM(S): Homo sapiens (Human) 
2024-12-23 | PXD051557 | Pride
4 pairs of matched primary versus metastatic tumor tissues from formalin-fixed, paraffin-embedded (FFPE) tissue bank,and two frozen lung tumor tissues from patients with primary orlymph metastasis. Then performed tandem mass tag (TMT) labeling and quantitative mass spectrometry analysis. A549 Cells ...
ORGANISM(S): Homo sapiens (Human) 
2022-02-17 | PXD025052 | Pride
To identify differentially expressed lipid metabolism-related genes (DE-LMRGs) responsible for immune dysfunction in sepsis. Machine learning algorithms were applied for screening hubgenes related to lipid metabolism. CIBERSORT and Single-sample GSEA were employed for assessing the immune cell infil...
2024-09-26 | MTBLS7315 | MetaboLights
GalNAc-T2 was identified as a novel antiviral factor that promotes viral clearance and contributes to reduced disease severity.This project aimed to investigate the impact of GalNAc-T2 overexpression on proteomics and glycoproteomics in lung cell. We employ SILAC labeling, lectin-based affinity enri...
ORGANISM(S): Homo sapiens (Human) 
2026-01-12 | PXD051101 | Pride
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